Protein–RNA interactions for Protein: Q99MH6

Nkd1, Protein naked cuticle homolog 1, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd1Q99MH6 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nkd1Q99MH6 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nkd1Q99MH6 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Nkd1Q99MH6 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nkd1Q99MH6 Gm7332-201ENSMUST00000118351 454 ntBASIC19.63■□□□□ 0.73
Nkd1Q99MH6 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC19.63■□□□□ 0.73
Nkd1Q99MH6 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Nkd1Q99MH6 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nkd1Q99MH6 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Nkd1Q99MH6 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Nkd1Q99MH6 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Nkd1Q99MH6 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nkd1Q99MH6 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nkd1Q99MH6 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nkd1Q99MH6 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nkd1Q99MH6 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nkd1Q99MH6 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nkd1Q99MH6 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Nkd1Q99MH6 Gm11175-201ENSMUST00000116172 543 ntBASIC19.62■□□□□ 0.73
Nkd1Q99MH6 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Nkd1Q99MH6 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nkd1Q99MH6 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nkd1Q99MH6 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nkd1Q99MH6 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC19.61■□□□□ 0.73
Nkd1Q99MH6 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC19.61■□□□□ 0.73
Nkd1Q99MH6 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC19.61■□□□□ 0.73
Nkd1Q99MH6 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nkd1Q99MH6 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nkd1Q99MH6 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nkd1Q99MH6 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Nkd1Q99MH6 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Nkd1Q99MH6 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Nkd1Q99MH6 Gm43403-201ENSMUST00000198011 1786 ntBASIC19.6■□□□□ 0.73
Nkd1Q99MH6 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Nkd1Q99MH6 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC19.6■□□□□ 0.73
Nkd1Q99MH6 Gm5987-201ENSMUST00000196433 1151 ntBASIC19.6■□□□□ 0.73
Nkd1Q99MH6 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Nkd1Q99MH6 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Nkd1Q99MH6 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nkd1Q99MH6 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
Nkd1Q99MH6 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC19.59■□□□□ 0.73
Nkd1Q99MH6 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nkd1Q99MH6 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC19.59■□□□□ 0.73
Nkd1Q99MH6 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Nkd1Q99MH6 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nkd1Q99MH6 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Nkd1Q99MH6 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Nkd1Q99MH6 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Nkd1Q99MH6 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Nkd1Q99MH6 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Nkd1Q99MH6 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Nkd1Q99MH6 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Nkd1Q99MH6 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Nkd1Q99MH6 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Nkd1Q99MH6 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Nkd1Q99MH6 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Nkd1Q99MH6 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Nkd1Q99MH6 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Nkd1Q99MH6 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Nkd1Q99MH6 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC19.57■□□□□ 0.72
Nkd1Q99MH6 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Nkd1Q99MH6 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Nkd1Q99MH6 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nkd1Q99MH6 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nkd1Q99MH6 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC19.56■□□□□ 0.72
Nkd1Q99MH6 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Nkd1Q99MH6 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC19.56■□□□□ 0.72
Nkd1Q99MH6 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC19.56■□□□□ 0.72
Nkd1Q99MH6 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Nkd1Q99MH6 Nsd1-206ENSMUST00000224918 1001 ntBASIC19.56■□□□□ 0.72
Nkd1Q99MH6 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Nkd1Q99MH6 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nkd1Q99MH6 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Nkd1Q99MH6 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Nkd1Q99MH6 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nkd1Q99MH6 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Nkd1Q99MH6 Gm20634-201ENSMUST00000090779 2956 ntBASIC19.55■□□□□ 0.72
Nkd1Q99MH6 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Nkd1Q99MH6 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Nkd1Q99MH6 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Nkd1Q99MH6 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Nkd1Q99MH6 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC19.55■□□□□ 0.72
Nkd1Q99MH6 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Nkd1Q99MH6 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Nkd1Q99MH6 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Nkd1Q99MH6 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Nkd1Q99MH6 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Nkd1Q99MH6 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Nkd1Q99MH6 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Nkd1Q99MH6 Gm43006-201ENSMUST00000197702 1602 ntBASIC19.54■□□□□ 0.72
Nkd1Q99MH6 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Nkd1Q99MH6 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Nkd1Q99MH6 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Nkd1Q99MH6 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Nkd1Q99MH6 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC19.53■□□□□ 0.72
Nkd1Q99MH6 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Nkd1Q99MH6 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Nkd1Q99MH6 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Nkd1Q99MH6 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Nkd1Q99MH6 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms