Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
Rfc4Q99J62 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Rfc4Q99J62 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC24.25■■□□□ 1.47
Rfc4Q99J62 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC24.25■■□□□ 1.47
Rfc4Q99J62 Gm2011-201ENSMUST00000203124 1263 ntBASIC24.25■■□□□ 1.47
Rfc4Q99J62 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
Rfc4Q99J62 AC158990.1-201ENSMUST00000221450 2016 ntBASIC24.25■■□□□ 1.47
Rfc4Q99J62 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Rfc4Q99J62 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC24.24■■□□□ 1.47
Rfc4Q99J62 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC24.24■■□□□ 1.47
Rfc4Q99J62 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Rfc4Q99J62 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC24.24■■□□□ 1.47
Rfc4Q99J62 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC24.24■■□□□ 1.47
Rfc4Q99J62 Gm43137-201ENSMUST00000198052 594 ntBASIC24.24■■□□□ 1.47
Rfc4Q99J62 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Rfc4Q99J62 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Rfc4Q99J62 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Rfc4Q99J62 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Rfc4Q99J62 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC24.23■■□□□ 1.47
Rfc4Q99J62 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC24.23■■□□□ 1.47
Rfc4Q99J62 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Rfc4Q99J62 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
Rfc4Q99J62 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC24.22■■□□□ 1.47
Rfc4Q99J62 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC24.22■■□□□ 1.47
Rfc4Q99J62 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC24.22■■□□□ 1.47
Rfc4Q99J62 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC24.22■■□□□ 1.47
Rfc4Q99J62 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC24.22■■□□□ 1.47
Rfc4Q99J62 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC24.21■■□□□ 1.47
Rfc4Q99J62 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Rfc4Q99J62 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
Rfc4Q99J62 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Rfc4Q99J62 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Rfc4Q99J62 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Rfc4Q99J62 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Rfc4Q99J62 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Rfc4Q99J62 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC24.2■■□□□ 1.47
Rfc4Q99J62 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
Rfc4Q99J62 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC24.2■■□□□ 1.46
Rfc4Q99J62 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
Rfc4Q99J62 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC24.2■■□□□ 1.46
Rfc4Q99J62 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC24.2■■□□□ 1.46
Rfc4Q99J62 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Rfc4Q99J62 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC24.2■■□□□ 1.46
Rfc4Q99J62 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC24.2■■□□□ 1.46
Rfc4Q99J62 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Rfc4Q99J62 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Rfc4Q99J62 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC24.19■■□□□ 1.46
Rfc4Q99J62 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC24.19■■□□□ 1.46
Rfc4Q99J62 Mir7075-201ENSMUST00000184187 82 ntBASIC24.19■■□□□ 1.46
Rfc4Q99J62 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC24.19■■□□□ 1.46
Rfc4Q99J62 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Rfc4Q99J62 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC24.19■■□□□ 1.46
Rfc4Q99J62 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC24.19■■□□□ 1.46
Rfc4Q99J62 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC24.19■■□□□ 1.46
Rfc4Q99J62 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
Rfc4Q99J62 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
Rfc4Q99J62 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC24.18■■□□□ 1.46
Rfc4Q99J62 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC24.18■■□□□ 1.46
Rfc4Q99J62 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC24.18■■□□□ 1.46
Rfc4Q99J62 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC24.18■■□□□ 1.46
Rfc4Q99J62 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
Rfc4Q99J62 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC24.18■■□□□ 1.46
Rfc4Q99J62 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Rfc4Q99J62 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC24.17■■□□□ 1.46
Rfc4Q99J62 Gm21168-201ENSMUST00000199646 1096 ntBASIC24.17■■□□□ 1.46
Rfc4Q99J62 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC24.17■■□□□ 1.46
Rfc4Q99J62 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Rfc4Q99J62 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Rfc4Q99J62 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC24.16■■□□□ 1.46
Rfc4Q99J62 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC24.16■■□□□ 1.46
Rfc4Q99J62 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
Rfc4Q99J62 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Rfc4Q99J62 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC24.15■■□□□ 1.46
Rfc4Q99J62 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Rfc4Q99J62 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC24.15■■□□□ 1.46
Rfc4Q99J62 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC24.15■■□□□ 1.46
Rfc4Q99J62 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC24.15■■□□□ 1.46
Rfc4Q99J62 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Rfc4Q99J62 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Rfc4Q99J62 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC24.15■■□□□ 1.46
Rfc4Q99J62 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC24.15■■□□□ 1.46
Rfc4Q99J62 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Rfc4Q99J62 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Rfc4Q99J62 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Rfc4Q99J62 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Rfc4Q99J62 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Rfc4Q99J62 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Rfc4Q99J62 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
Rfc4Q99J62 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
Rfc4Q99J62 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
Rfc4Q99J62 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Rfc4Q99J62 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
Rfc4Q99J62 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Rfc4Q99J62 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC24.14■■□□□ 1.45
Rfc4Q99J62 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
Rfc4Q99J62 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Rfc4Q99J62 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
Rfc4Q99J62 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Rfc4Q99J62 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Rfc4Q99J62 Gm43017-201ENSMUST00000198296 752 ntBASIC24.13■■□□□ 1.45
Retrieved 100 of 76,532 protein–RNA pairs in 12.4 ms