Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Thumpd1Q99J36 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
Thumpd1Q99J36 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Thumpd1Q99J36 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC18.62■□□□□ 0.57
Thumpd1Q99J36 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
Thumpd1Q99J36 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Thumpd1Q99J36 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Thumpd1Q99J36 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Thumpd1Q99J36 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC18.62■□□□□ 0.57
Thumpd1Q99J36 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Thumpd1Q99J36 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC18.61■□□□□ 0.57
Thumpd1Q99J36 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Thumpd1Q99J36 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Thumpd1Q99J36 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Thumpd1Q99J36 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Thumpd1Q99J36 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Thumpd1Q99J36 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Thumpd1Q99J36 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Thumpd1Q99J36 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
Thumpd1Q99J36 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC18.6■□□□□ 0.57
Thumpd1Q99J36 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Thumpd1Q99J36 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Thumpd1Q99J36 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Thumpd1Q99J36 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC18.6■□□□□ 0.57
Thumpd1Q99J36 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Thumpd1Q99J36 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Thumpd1Q99J36 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Thumpd1Q99J36 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Thumpd1Q99J36 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Thumpd1Q99J36 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Thumpd1Q99J36 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Thumpd1Q99J36 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Thumpd1Q99J36 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Thumpd1Q99J36 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC18.59■□□□□ 0.57
Thumpd1Q99J36 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Thumpd1Q99J36 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
Thumpd1Q99J36 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Thumpd1Q99J36 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Thumpd1Q99J36 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Thumpd1Q99J36 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC18.58■□□□□ 0.57
Thumpd1Q99J36 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
Thumpd1Q99J36 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Thumpd1Q99J36 Gm6311-201ENSMUST00000073790 878 ntBASIC18.58■□□□□ 0.56
Thumpd1Q99J36 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Thumpd1Q99J36 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Thumpd1Q99J36 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Thumpd1Q99J36 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Thumpd1Q99J36 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Thumpd1Q99J36 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Thumpd1Q99J36 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Thumpd1Q99J36 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Thumpd1Q99J36 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Thumpd1Q99J36 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Thumpd1Q99J36 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Thumpd1Q99J36 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Thumpd1Q99J36 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Thumpd1Q99J36 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC18.56■□□□□ 0.56
Thumpd1Q99J36 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Thumpd1Q99J36 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Thumpd1Q99J36 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Thumpd1Q99J36 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Thumpd1Q99J36 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Thumpd1Q99J36 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Thumpd1Q99J36 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Thumpd1Q99J36 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Thumpd1Q99J36 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Thumpd1Q99J36 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Thumpd1Q99J36 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Thumpd1Q99J36 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Thumpd1Q99J36 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Thumpd1Q99J36 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC18.55■□□□□ 0.56
Thumpd1Q99J36 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC18.55■□□□□ 0.56
Thumpd1Q99J36 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Thumpd1Q99J36 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Thumpd1Q99J36 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Thumpd1Q99J36 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC18.54■□□□□ 0.56
Thumpd1Q99J36 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Thumpd1Q99J36 Gm10616-201ENSMUST00000205285 2127 ntBASIC18.54■□□□□ 0.56
Thumpd1Q99J36 AC116713.1-201ENSMUST00000215074 430 ntBASIC18.54■□□□□ 0.56
Thumpd1Q99J36 Nsd1-206ENSMUST00000224918 1001 ntBASIC18.54■□□□□ 0.56
Thumpd1Q99J36 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Thumpd1Q99J36 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Thumpd1Q99J36 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Thumpd1Q99J36 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Thumpd1Q99J36 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Thumpd1Q99J36 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Thumpd1Q99J36 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
Thumpd1Q99J36 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC18.53■□□□□ 0.56
Thumpd1Q99J36 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
Thumpd1Q99J36 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Thumpd1Q99J36 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Thumpd1Q99J36 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Thumpd1Q99J36 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Thumpd1Q99J36 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Thumpd1Q99J36 Gm4430-201ENSMUST00000192413 1943 ntBASIC18.53■□□□□ 0.56
Thumpd1Q99J36 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Thumpd1Q99J36 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Thumpd1Q99J36 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Thumpd1Q99J36 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
Thumpd1Q99J36 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 13.9 ms