Protein–RNA interactions for Protein: Q925H1

Trps1, Zinc finger transcription factor Trps1, mousemouse

Predictions only

Length 1,281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trps1Q925H1 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Trps1Q925H1 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Trps1Q925H1 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
Trps1Q925H1 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.07
Trps1Q925H1 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
Trps1Q925H1 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Trps1Q925H1 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Trps1Q925H1 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
Trps1Q925H1 Gm10232-201ENSMUST00000089221 720 ntBASIC21.76■■□□□ 1.07
Trps1Q925H1 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC21.76■■□□□ 1.07
Trps1Q925H1 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Trps1Q925H1 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Trps1Q925H1 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC21.75■■□□□ 1.07
Trps1Q925H1 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Trps1Q925H1 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Trps1Q925H1 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Trps1Q925H1 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC21.75■■□□□ 1.07
Trps1Q925H1 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Trps1Q925H1 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC21.74■■□□□ 1.07
Trps1Q925H1 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Trps1Q925H1 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
Trps1Q925H1 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
Trps1Q925H1 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Trps1Q925H1 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC21.74■■□□□ 1.07
Trps1Q925H1 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC21.74■■□□□ 1.07
Trps1Q925H1 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC21.74■■□□□ 1.07
Trps1Q925H1 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
Trps1Q925H1 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Trps1Q925H1 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC21.74■■□□□ 1.07
Trps1Q925H1 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Trps1Q925H1 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Trps1Q925H1 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Trps1Q925H1 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Trps1Q925H1 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Trps1Q925H1 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Trps1Q925H1 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Trps1Q925H1 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Trps1Q925H1 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
Trps1Q925H1 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Trps1Q925H1 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Trps1Q925H1 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Trps1Q925H1 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Trps1Q925H1 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC21.71■■□□□ 1.07
Trps1Q925H1 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Trps1Q925H1 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
Trps1Q925H1 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Trps1Q925H1 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Trps1Q925H1 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC21.7■■□□□ 1.06
Trps1Q925H1 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
Trps1Q925H1 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Trps1Q925H1 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Trps1Q925H1 Gm44949-201ENSMUST00000206423 1450 ntBASIC21.7■■□□□ 1.06
Trps1Q925H1 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Trps1Q925H1 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Trps1Q925H1 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Trps1Q925H1 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
Trps1Q925H1 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Trps1Q925H1 Gm10620-201ENSMUST00000098379 1332 ntBASIC21.69■■□□□ 1.06
Trps1Q925H1 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Trps1Q925H1 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Trps1Q925H1 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Trps1Q925H1 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Trps1Q925H1 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Trps1Q925H1 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
Trps1Q925H1 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Trps1Q925H1 Kdm3b-204ENSMUST00000224715 2032 ntBASIC21.68■■□□□ 1.06
Trps1Q925H1 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC21.68■■□□□ 1.06
Trps1Q925H1 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC21.68■■□□□ 1.06
Trps1Q925H1 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Trps1Q925H1 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
Trps1Q925H1 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Trps1Q925H1 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC21.68■■□□□ 1.06
Trps1Q925H1 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Trps1Q925H1 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Trps1Q925H1 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Trps1Q925H1 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
Trps1Q925H1 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Trps1Q925H1 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Trps1Q925H1 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC21.66■■□□□ 1.06
Trps1Q925H1 Gm10399-202ENSMUST00000202768 748 ntBASIC21.66■■□□□ 1.06
Trps1Q925H1 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC21.66■■□□□ 1.06
Trps1Q925H1 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Trps1Q925H1 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Trps1Q925H1 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Trps1Q925H1 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Trps1Q925H1 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Trps1Q925H1 Gm5913-201ENSMUST00000119397 1399 ntBASIC21.65■■□□□ 1.06
Trps1Q925H1 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Trps1Q925H1 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
Trps1Q925H1 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC21.65■■□□□ 1.06
Trps1Q925H1 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Trps1Q925H1 Gm5812-201ENSMUST00000061073 957 ntBASIC21.65■■□□□ 1.06
Trps1Q925H1 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
Trps1Q925H1 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Trps1Q925H1 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC21.65■■□□□ 1.06
Trps1Q925H1 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Trps1Q925H1 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Trps1Q925H1 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Trps1Q925H1 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Trps1Q925H1 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms