Protein–RNA interactions for Protein: Q91Y19

Pcdha11, Protocadherin alpha 11, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha11Q91Y19 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Pcdha11Q91Y19 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC22.02■■□□□ 1.12
Pcdha11Q91Y19 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC22.01■■□□□ 1.11
Pcdha11Q91Y19 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Pcdha11Q91Y19 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Pcdha11Q91Y19 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Pcdha11Q91Y19 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC22.01■■□□□ 1.11
Pcdha11Q91Y19 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC22.01■■□□□ 1.11
Pcdha11Q91Y19 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Pcdha11Q91Y19 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Pcdha11Q91Y19 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC22.01■■□□□ 1.11
Pcdha11Q91Y19 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Pcdha11Q91Y19 Gm17641-201ENSMUST00000166328 2350 ntBASIC22.01■■□□□ 1.11
Pcdha11Q91Y19 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
Pcdha11Q91Y19 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Pcdha11Q91Y19 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC22■■□□□ 1.11
Pcdha11Q91Y19 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Pcdha11Q91Y19 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Pcdha11Q91Y19 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Pcdha11Q91Y19 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
Pcdha11Q91Y19 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Pcdha11Q91Y19 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC21.99■■□□□ 1.11
Pcdha11Q91Y19 Gm22238-201ENSMUST00000175222 88 ntBASIC21.99■■□□□ 1.11
Pcdha11Q91Y19 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC21.99■■□□□ 1.11
Pcdha11Q91Y19 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Pcdha11Q91Y19 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Pcdha11Q91Y19 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Pcdha11Q91Y19 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Pcdha11Q91Y19 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC21.99■■□□□ 1.11
Pcdha11Q91Y19 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Pcdha11Q91Y19 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC21.98■■□□□ 1.11
Pcdha11Q91Y19 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC21.98■■□□□ 1.11
Pcdha11Q91Y19 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC21.98■■□□□ 1.11
Pcdha11Q91Y19 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
Pcdha11Q91Y19 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
Pcdha11Q91Y19 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Pcdha11Q91Y19 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
Pcdha11Q91Y19 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Pcdha11Q91Y19 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC21.97■■□□□ 1.11
Pcdha11Q91Y19 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Pcdha11Q91Y19 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
Pcdha11Q91Y19 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Pcdha11Q91Y19 Gm42418-201ENSMUST00000182010 1831 ntBASIC21.96■■□□□ 1.11
Pcdha11Q91Y19 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Pcdha11Q91Y19 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC21.96■■□□□ 1.11
Pcdha11Q91Y19 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Pcdha11Q91Y19 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
Pcdha11Q91Y19 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Pcdha11Q91Y19 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Pcdha11Q91Y19 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Pcdha11Q91Y19 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Pcdha11Q91Y19 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Pcdha11Q91Y19 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC21.95■■□□□ 1.1
Pcdha11Q91Y19 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Pcdha11Q91Y19 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC21.95■■□□□ 1.1
Pcdha11Q91Y19 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Pcdha11Q91Y19 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
Pcdha11Q91Y19 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Pcdha11Q91Y19 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Pcdha11Q91Y19 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Pcdha11Q91Y19 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Pcdha11Q91Y19 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
Pcdha11Q91Y19 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Pcdha11Q91Y19 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Pcdha11Q91Y19 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Pcdha11Q91Y19 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
Pcdha11Q91Y19 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Pcdha11Q91Y19 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Pcdha11Q91Y19 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Pcdha11Q91Y19 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Pcdha11Q91Y19 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Pcdha11Q91Y19 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Pcdha11Q91Y19 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Pcdha11Q91Y19 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Pcdha11Q91Y19 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
Pcdha11Q91Y19 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Pcdha11Q91Y19 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Pcdha11Q91Y19 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Pcdha11Q91Y19 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Pcdha11Q91Y19 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC21.91■■□□□ 1.1
Pcdha11Q91Y19 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Pcdha11Q91Y19 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Pcdha11Q91Y19 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
Pcdha11Q91Y19 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Pcdha11Q91Y19 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Pcdha11Q91Y19 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Pcdha11Q91Y19 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.1
Pcdha11Q91Y19 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Pcdha11Q91Y19 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Pcdha11Q91Y19 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
Pcdha11Q91Y19 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Pcdha11Q91Y19 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Pcdha11Q91Y19 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Pcdha11Q91Y19 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Pcdha11Q91Y19 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
Pcdha11Q91Y19 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Pcdha11Q91Y19 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Pcdha11Q91Y19 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Pcdha11Q91Y19 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Pcdha11Q91Y19 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms