Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Pcdhb1Q91Y08 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Pcdhb1Q91Y08 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Pcdhb1Q91Y08 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
Pcdhb1Q91Y08 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Pcdhb1Q91Y08 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Pcdhb1Q91Y08 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Pcdhb1Q91Y08 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Pcdhb1Q91Y08 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
Pcdhb1Q91Y08 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC21.79■■□□□ 1.08
Pcdhb1Q91Y08 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Pcdhb1Q91Y08 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Pcdhb1Q91Y08 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Pcdhb1Q91Y08 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Pcdhb1Q91Y08 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
Pcdhb1Q91Y08 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
Pcdhb1Q91Y08 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC21.79■■□□□ 1.08
Pcdhb1Q91Y08 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Pcdhb1Q91Y08 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC21.78■■□□□ 1.08
Pcdhb1Q91Y08 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
Pcdhb1Q91Y08 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC21.78■■□□□ 1.08
Pcdhb1Q91Y08 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Pcdhb1Q91Y08 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Pcdhb1Q91Y08 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Pcdhb1Q91Y08 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
Pcdhb1Q91Y08 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Pcdhb1Q91Y08 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Pcdhb1Q91Y08 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Pcdhb1Q91Y08 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Pcdhb1Q91Y08 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
Pcdhb1Q91Y08 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC21.77■■□□□ 1.08
Pcdhb1Q91Y08 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pcdhb1Q91Y08 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC21.76■■□□□ 1.07
Pcdhb1Q91Y08 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pcdhb1Q91Y08 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pcdhb1Q91Y08 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pcdhb1Q91Y08 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pcdhb1Q91Y08 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pcdhb1Q91Y08 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pcdhb1Q91Y08 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
Pcdhb1Q91Y08 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC21.75■■□□□ 1.07
Pcdhb1Q91Y08 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
Pcdhb1Q91Y08 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pcdhb1Q91Y08 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pcdhb1Q91Y08 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC21.75■■□□□ 1.07
Pcdhb1Q91Y08 Gm44949-201ENSMUST00000206423 1450 ntBASIC21.75■■□□□ 1.07
Pcdhb1Q91Y08 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
Pcdhb1Q91Y08 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pcdhb1Q91Y08 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pcdhb1Q91Y08 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pcdhb1Q91Y08 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pcdhb1Q91Y08 Gm6277-202ENSMUST00000224036 2779 ntBASIC21.74■■□□□ 1.07
Pcdhb1Q91Y08 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
Pcdhb1Q91Y08 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Pcdhb1Q91Y08 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pcdhb1Q91Y08 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pcdhb1Q91Y08 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pcdhb1Q91Y08 Kdm3b-204ENSMUST00000224715 2032 ntBASIC21.72■■□□□ 1.07
Pcdhb1Q91Y08 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pcdhb1Q91Y08 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Pcdhb1Q91Y08 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Pcdhb1Q91Y08 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdhb1Q91Y08 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdhb1Q91Y08 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdhb1Q91Y08 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdhb1Q91Y08 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdhb1Q91Y08 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdhb1Q91Y08 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
Pcdhb1Q91Y08 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC21.71■■□□□ 1.07
Pcdhb1Q91Y08 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
Pcdhb1Q91Y08 Gm5913-201ENSMUST00000119397 1399 ntBASIC21.71■■□□□ 1.07
Pcdhb1Q91Y08 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdhb1Q91Y08 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdhb1Q91Y08 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pcdhb1Q91Y08 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
Pcdhb1Q91Y08 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pcdhb1Q91Y08 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC21.7■■□□□ 1.06
Pcdhb1Q91Y08 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pcdhb1Q91Y08 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pcdhb1Q91Y08 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pcdhb1Q91Y08 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pcdhb1Q91Y08 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Pcdhb1Q91Y08 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pcdhb1Q91Y08 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pcdhb1Q91Y08 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC21.68■■□□□ 1.06
Pcdhb1Q91Y08 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pcdhb1Q91Y08 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pcdhb1Q91Y08 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pcdhb1Q91Y08 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pcdhb1Q91Y08 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Pcdhb1Q91Y08 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC21.67■■□□□ 1.06
Pcdhb1Q91Y08 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC21.67■■□□□ 1.06
Pcdhb1Q91Y08 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pcdhb1Q91Y08 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Pcdhb1Q91Y08 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC21.66■■□□□ 1.06
Pcdhb1Q91Y08 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC21.66■■□□□ 1.06
Pcdhb1Q91Y08 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
Pcdhb1Q91Y08 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Pcdhb1Q91Y08 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Pcdhb1Q91Y08 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms