Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdhb3Q91XZ7 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pcdhb3Q91XZ7 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pcdhb3Q91XZ7 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pcdhb3Q91XZ7 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pcdhb3Q91XZ7 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pcdhb3Q91XZ7 Gm43545-201ENSMUST00000196765 2779 ntBASIC20.69■□□□□ 0.9
Pcdhb3Q91XZ7 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pcdhb3Q91XZ7 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pcdhb3Q91XZ7 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Pcdhb3Q91XZ7 Snhg20-203ENSMUST00000182811 2153 ntBASIC20.68■□□□□ 0.9
Pcdhb3Q91XZ7 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Pcdhb3Q91XZ7 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdhb3Q91XZ7 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdhb3Q91XZ7 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdhb3Q91XZ7 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdhb3Q91XZ7 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdhb3Q91XZ7 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdhb3Q91XZ7 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC20.67■□□□□ 0.9
Pcdhb3Q91XZ7 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdhb3Q91XZ7 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdhb3Q91XZ7 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC20.67■□□□□ 0.9
Pcdhb3Q91XZ7 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdhb3Q91XZ7 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdhb3Q91XZ7 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdhb3Q91XZ7 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Pcdhb3Q91XZ7 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Pcdhb3Q91XZ7 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC20.67■□□□□ 0.9
Pcdhb3Q91XZ7 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdhb3Q91XZ7 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdhb3Q91XZ7 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdhb3Q91XZ7 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Pcdhb3Q91XZ7 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdhb3Q91XZ7 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdhb3Q91XZ7 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC20.66■□□□□ 0.9
Pcdhb3Q91XZ7 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdhb3Q91XZ7 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Pcdhb3Q91XZ7 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdhb3Q91XZ7 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdhb3Q91XZ7 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC20.65■□□□□ 0.9
Pcdhb3Q91XZ7 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Pcdhb3Q91XZ7 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdhb3Q91XZ7 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdhb3Q91XZ7 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC20.64■□□□□ 0.89
Pcdhb3Q91XZ7 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
Pcdhb3Q91XZ7 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC20.64■□□□□ 0.89
Pcdhb3Q91XZ7 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pcdhb3Q91XZ7 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Pcdhb3Q91XZ7 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pcdhb3Q91XZ7 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdhb3Q91XZ7 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdhb3Q91XZ7 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdhb3Q91XZ7 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.63■□□□□ 0.89
Pcdhb3Q91XZ7 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdhb3Q91XZ7 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdhb3Q91XZ7 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC20.62■□□□□ 0.89
Pcdhb3Q91XZ7 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdhb3Q91XZ7 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC20.62■□□□□ 0.89
Pcdhb3Q91XZ7 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdhb3Q91XZ7 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdhb3Q91XZ7 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdhb3Q91XZ7 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
Pcdhb3Q91XZ7 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdhb3Q91XZ7 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdhb3Q91XZ7 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdhb3Q91XZ7 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdhb3Q91XZ7 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC20.62■□□□□ 0.89
Pcdhb3Q91XZ7 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdhb3Q91XZ7 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdhb3Q91XZ7 Gm44428-201ENSMUST00000204474 874 ntBASIC20.61■□□□□ 0.89
Pcdhb3Q91XZ7 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC20.61■□□□□ 0.89
Pcdhb3Q91XZ7 AC151971.4-201ENSMUST00000214717 704 ntBASIC20.61■□□□□ 0.89
Pcdhb3Q91XZ7 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Pcdhb3Q91XZ7 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdhb3Q91XZ7 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Pcdhb3Q91XZ7 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdhb3Q91XZ7 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC20.6■□□□□ 0.89
Pcdhb3Q91XZ7 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
Pcdhb3Q91XZ7 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Pcdhb3Q91XZ7 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdhb3Q91XZ7 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC20.6■□□□□ 0.89
Pcdhb3Q91XZ7 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdhb3Q91XZ7 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Pcdhb3Q91XZ7 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdhb3Q91XZ7 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdhb3Q91XZ7 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdhb3Q91XZ7 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdhb3Q91XZ7 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdhb3Q91XZ7 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC20.59■□□□□ 0.89
Pcdhb3Q91XZ7 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdhb3Q91XZ7 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC20.59■□□□□ 0.89
Pcdhb3Q91XZ7 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdhb3Q91XZ7 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Pcdhb3Q91XZ7 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pcdhb3Q91XZ7 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pcdhb3Q91XZ7 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pcdhb3Q91XZ7 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.58■□□□□ 0.89
Pcdhb3Q91XZ7 Gm22567-201ENSMUST00000175542 342 ntBASIC20.58■□□□□ 0.89
Pcdhb3Q91XZ7 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Pcdhb3Q91XZ7 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 67.1 ms