Protein–RNA interactions for Protein: Q91XX9

Pcdhga9, Protocadherin gamma A9, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga9Q91XX9 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC20.68■□□□□ 0.9
Pcdhga9Q91XX9 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdhga9Q91XX9 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdhga9Q91XX9 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Pcdhga9Q91XX9 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Pcdhga9Q91XX9 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdhga9Q91XX9 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdhga9Q91XX9 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdhga9Q91XX9 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdhga9Q91XX9 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Pcdhga9Q91XX9 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
Pcdhga9Q91XX9 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdhga9Q91XX9 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Pcdhga9Q91XX9 Dmtn-209ENSMUST00000228295 2572 ntBASIC20.66■□□□□ 0.9
Pcdhga9Q91XX9 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdhga9Q91XX9 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdhga9Q91XX9 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdhga9Q91XX9 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdhga9Q91XX9 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdhga9Q91XX9 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC20.65■□□□□ 0.9
Pcdhga9Q91XX9 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC20.65■□□□□ 0.9
Pcdhga9Q91XX9 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
Pcdhga9Q91XX9 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdhga9Q91XX9 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC20.64■□□□□ 0.9
Pcdhga9Q91XX9 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Pcdhga9Q91XX9 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pcdhga9Q91XX9 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC20.64■□□□□ 0.89
Pcdhga9Q91XX9 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Pcdhga9Q91XX9 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pcdhga9Q91XX9 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Pcdhga9Q91XX9 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdhga9Q91XX9 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdhga9Q91XX9 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdhga9Q91XX9 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdhga9Q91XX9 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC20.63■□□□□ 0.89
Pcdhga9Q91XX9 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Pcdhga9Q91XX9 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdhga9Q91XX9 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdhga9Q91XX9 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdhga9Q91XX9 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdhga9Q91XX9 AC164883.3-201ENSMUST00000227396 1774 ntBASIC20.62■□□□□ 0.89
Pcdhga9Q91XX9 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC20.62■□□□□ 0.89
Pcdhga9Q91XX9 Gm5131-201ENSMUST00000212776 1238 ntBASIC20.62■□□□□ 0.89
Pcdhga9Q91XX9 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC20.62■□□□□ 0.89
Pcdhga9Q91XX9 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdhga9Q91XX9 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.62■□□□□ 0.89
Pcdhga9Q91XX9 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
Pcdhga9Q91XX9 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdhga9Q91XX9 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdhga9Q91XX9 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdhga9Q91XX9 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdhga9Q91XX9 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdhga9Q91XX9 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.61■□□□□ 0.89
Pcdhga9Q91XX9 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdhga9Q91XX9 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdhga9Q91XX9 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdhga9Q91XX9 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdhga9Q91XX9 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdhga9Q91XX9 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdhga9Q91XX9 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdhga9Q91XX9 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdhga9Q91XX9 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
Pcdhga9Q91XX9 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdhga9Q91XX9 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdhga9Q91XX9 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdhga9Q91XX9 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdhga9Q91XX9 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdhga9Q91XX9 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdhga9Q91XX9 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Pcdhga9Q91XX9 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC20.6■□□□□ 0.89
Pcdhga9Q91XX9 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC20.6■□□□□ 0.89
Pcdhga9Q91XX9 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC20.6■□□□□ 0.89
Pcdhga9Q91XX9 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdhga9Q91XX9 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdhga9Q91XX9 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdhga9Q91XX9 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdhga9Q91XX9 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdhga9Q91XX9 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdhga9Q91XX9 Gm32051-202ENSMUST00000197905 2385 ntBASIC20.59■□□□□ 0.89
Pcdhga9Q91XX9 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdhga9Q91XX9 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdhga9Q91XX9 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdhga9Q91XX9 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC20.59■□□□□ 0.89
Pcdhga9Q91XX9 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC20.59■□□□□ 0.89
Pcdhga9Q91XX9 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC20.59■□□□□ 0.89
Pcdhga9Q91XX9 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdhga9Q91XX9 Gm43403-201ENSMUST00000198011 1786 ntBASIC20.59■□□□□ 0.89
Pcdhga9Q91XX9 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC20.59■□□□□ 0.89
Pcdhga9Q91XX9 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pcdhga9Q91XX9 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.58■□□□□ 0.89
Pcdhga9Q91XX9 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC20.58■□□□□ 0.89
Pcdhga9Q91XX9 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pcdhga9Q91XX9 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC20.58■□□□□ 0.89
Pcdhga9Q91XX9 Gm10399-202ENSMUST00000202768 748 ntBASIC20.58■□□□□ 0.89
Pcdhga9Q91XX9 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Pcdhga9Q91XX9 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.58■□□□□ 0.88
Pcdhga9Q91XX9 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
Pcdhga9Q91XX9 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC20.58■□□□□ 0.88
Pcdhga9Q91XX9 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Pcdhga9Q91XX9 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 13.7 ms