Protein–RNA interactions for Protein: Q91XX7

Pcdhgb2, Protocadherin gamma B2, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb2Q91XX7 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pcdhgb2Q91XX7 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC19.61■□□□□ 0.73
Pcdhgb2Q91XX7 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdhgb2Q91XX7 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdhgb2Q91XX7 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdhgb2Q91XX7 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC19.61■□□□□ 0.73
Pcdhgb2Q91XX7 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdhgb2Q91XX7 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdhgb2Q91XX7 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdhgb2Q91XX7 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Pcdhgb2Q91XX7 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdhgb2Q91XX7 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdhgb2Q91XX7 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdhgb2Q91XX7 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pcdhgb2Q91XX7 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdhgb2Q91XX7 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdhgb2Q91XX7 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdhgb2Q91XX7 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdhgb2Q91XX7 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdhgb2Q91XX7 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Pcdhgb2Q91XX7 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
Pcdhgb2Q91XX7 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhgb2Q91XX7 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhgb2Q91XX7 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhgb2Q91XX7 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhgb2Q91XX7 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC19.59■□□□□ 0.73
Pcdhgb2Q91XX7 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhgb2Q91XX7 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC19.59■□□□□ 0.73
Pcdhgb2Q91XX7 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhgb2Q91XX7 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pcdhgb2Q91XX7 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Pcdhgb2Q91XX7 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Pcdhgb2Q91XX7 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC19.58■□□□□ 0.72
Pcdhgb2Q91XX7 Gm44949-201ENSMUST00000206423 1450 ntBASIC19.58■□□□□ 0.72
Pcdhgb2Q91XX7 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdhgb2Q91XX7 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdhgb2Q91XX7 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdhgb2Q91XX7 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Pcdhgb2Q91XX7 Gm5987-201ENSMUST00000196433 1151 ntBASIC19.57■□□□□ 0.72
Pcdhgb2Q91XX7 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdhgb2Q91XX7 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdhgb2Q91XX7 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdhgb2Q91XX7 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdhgb2Q91XX7 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Pcdhgb2Q91XX7 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Pcdhgb2Q91XX7 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.56■□□□□ 0.72
Pcdhgb2Q91XX7 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdhgb2Q91XX7 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdhgb2Q91XX7 Gm11687-201ENSMUST00000118911 886 ntBASIC19.56■□□□□ 0.72
Pcdhgb2Q91XX7 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdhgb2Q91XX7 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Pcdhgb2Q91XX7 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Pcdhgb2Q91XX7 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdhgb2Q91XX7 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdhgb2Q91XX7 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdhgb2Q91XX7 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdhgb2Q91XX7 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdhgb2Q91XX7 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Pcdhgb2Q91XX7 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdhgb2Q91XX7 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdhgb2Q91XX7 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC19.55■□□□□ 0.72
Pcdhgb2Q91XX7 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdhgb2Q91XX7 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdhgb2Q91XX7 Gm4430-201ENSMUST00000192413 1943 ntBASIC19.54■□□□□ 0.72
Pcdhgb2Q91XX7 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdhgb2Q91XX7 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdhgb2Q91XX7 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Pcdhgb2Q91XX7 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdhgb2Q91XX7 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pcdhgb2Q91XX7 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC19.52■□□□□ 0.72
Pcdhgb2Q91XX7 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pcdhgb2Q91XX7 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pcdhgb2Q91XX7 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC19.52■□□□□ 0.72
Pcdhgb2Q91XX7 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC19.52■□□□□ 0.71
Pcdhgb2Q91XX7 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdhgb2Q91XX7 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Pcdhgb2Q91XX7 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdhgb2Q91XX7 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdhgb2Q91XX7 Nsd1-206ENSMUST00000224918 1001 ntBASIC19.51■□□□□ 0.71
Pcdhgb2Q91XX7 Gm5913-201ENSMUST00000119397 1399 ntBASIC19.51■□□□□ 0.71
Pcdhgb2Q91XX7 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdhgb2Q91XX7 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdhgb2Q91XX7 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdhgb2Q91XX7 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
Pcdhgb2Q91XX7 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdhgb2Q91XX7 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdhgb2Q91XX7 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdhgb2Q91XX7 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdhgb2Q91XX7 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdhgb2Q91XX7 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Pcdhgb2Q91XX7 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhgb2Q91XX7 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhgb2Q91XX7 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhgb2Q91XX7 AC151971.4-201ENSMUST00000214717 704 ntBASIC19.49■□□□□ 0.71
Pcdhgb2Q91XX7 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhgb2Q91XX7 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdhgb2Q91XX7 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC19.48■□□□□ 0.71
Pcdhgb2Q91XX7 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdhgb2Q91XX7 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdhgb2Q91XX7 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 11 ms