Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Vsx1Q91V10 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
Vsx1Q91V10 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC20.75■□□□□ 0.91
Vsx1Q91V10 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Vsx1Q91V10 Gm43137-201ENSMUST00000198052 594 ntBASIC20.75■□□□□ 0.91
Vsx1Q91V10 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Vsx1Q91V10 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Vsx1Q91V10 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC20.75■□□□□ 0.91
Vsx1Q91V10 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Vsx1Q91V10 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Vsx1Q91V10 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC20.74■□□□□ 0.91
Vsx1Q91V10 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Vsx1Q91V10 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Vsx1Q91V10 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Vsx1Q91V10 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Vsx1Q91V10 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Vsx1Q91V10 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Vsx1Q91V10 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Vsx1Q91V10 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC20.73■□□□□ 0.91
Vsx1Q91V10 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Vsx1Q91V10 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Vsx1Q91V10 Gm5874-201ENSMUST00000096101 508 ntBASIC20.73■□□□□ 0.91
Vsx1Q91V10 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC20.72■□□□□ 0.91
Vsx1Q91V10 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Vsx1Q91V10 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Vsx1Q91V10 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Vsx1Q91V10 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Vsx1Q91V10 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC20.72■□□□□ 0.91
Vsx1Q91V10 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Vsx1Q91V10 H3f3aos-201ENSMUST00000097448 2905 ntBASIC20.72■□□□□ 0.91
Vsx1Q91V10 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC20.72■□□□□ 0.91
Vsx1Q91V10 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Vsx1Q91V10 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Vsx1Q91V10 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC20.72■□□□□ 0.91
Vsx1Q91V10 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Vsx1Q91V10 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Vsx1Q91V10 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Vsx1Q91V10 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Vsx1Q91V10 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC20.71■□□□□ 0.91
Vsx1Q91V10 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Vsx1Q91V10 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Vsx1Q91V10 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
Vsx1Q91V10 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Vsx1Q91V10 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Vsx1Q91V10 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Vsx1Q91V10 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Vsx1Q91V10 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Vsx1Q91V10 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Vsx1Q91V10 Mir7075-201ENSMUST00000184187 82 ntBASIC20.7■□□□□ 0.9
Vsx1Q91V10 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Vsx1Q91V10 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Vsx1Q91V10 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
Vsx1Q91V10 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
Vsx1Q91V10 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Vsx1Q91V10 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Vsx1Q91V10 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Vsx1Q91V10 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Vsx1Q91V10 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Vsx1Q91V10 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Vsx1Q91V10 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Vsx1Q91V10 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Vsx1Q91V10 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Vsx1Q91V10 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC20.67■□□□□ 0.9
Vsx1Q91V10 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC20.67■□□□□ 0.9
Vsx1Q91V10 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Vsx1Q91V10 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Vsx1Q91V10 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Vsx1Q91V10 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC20.67■□□□□ 0.9
Vsx1Q91V10 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Vsx1Q91V10 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Vsx1Q91V10 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Vsx1Q91V10 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Vsx1Q91V10 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Vsx1Q91V10 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC20.66■□□□□ 0.9
Vsx1Q91V10 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
Vsx1Q91V10 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Vsx1Q91V10 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Vsx1Q91V10 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Vsx1Q91V10 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC20.66■□□□□ 0.9
Vsx1Q91V10 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Vsx1Q91V10 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Vsx1Q91V10 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Vsx1Q91V10 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Vsx1Q91V10 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Vsx1Q91V10 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC20.65■□□□□ 0.9
Vsx1Q91V10 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Vsx1Q91V10 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC20.64■□□□□ 0.9
Vsx1Q91V10 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Vsx1Q91V10 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC20.64■□□□□ 0.9
Vsx1Q91V10 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Vsx1Q91V10 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Vsx1Q91V10 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
Vsx1Q91V10 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Vsx1Q91V10 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Vsx1Q91V10 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Vsx1Q91V10 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Vsx1Q91V10 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Vsx1Q91V10 Gm7291-201ENSMUST00000199147 382 ntBASIC20.63■□□□□ 0.89
Vsx1Q91V10 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Vsx1Q91V10 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms