Protein–RNA interactions for Protein: Q8VEE1

Lmcd1, LIM and cysteine-rich domains protein 1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmcd1Q8VEE1 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Lmcd1Q8VEE1 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC22.59■■□□□ 1.21
Lmcd1Q8VEE1 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Lmcd1Q8VEE1 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC22.58■■□□□ 1.21
Lmcd1Q8VEE1 Gm43759-201ENSMUST00000196925 1261 ntBASIC22.58■■□□□ 1.21
Lmcd1Q8VEE1 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Lmcd1Q8VEE1 Gm10657-201ENSMUST00000193528 1031 ntBASIC22.57■■□□□ 1.2
Lmcd1Q8VEE1 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Lmcd1Q8VEE1 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
Lmcd1Q8VEE1 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Lmcd1Q8VEE1 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
Lmcd1Q8VEE1 Gm12251-201ENSMUST00000117893 792 ntBASIC22.56■■□□□ 1.2
Lmcd1Q8VEE1 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC22.56■■□□□ 1.2
Lmcd1Q8VEE1 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Lmcd1Q8VEE1 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Lmcd1Q8VEE1 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC22.56■■□□□ 1.2
Lmcd1Q8VEE1 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Lmcd1Q8VEE1 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Lmcd1Q8VEE1 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
Lmcd1Q8VEE1 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Lmcd1Q8VEE1 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Lmcd1Q8VEE1 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Lmcd1Q8VEE1 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC22.55■■□□□ 1.2
Lmcd1Q8VEE1 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
Lmcd1Q8VEE1 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Lmcd1Q8VEE1 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Lmcd1Q8VEE1 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Lmcd1Q8VEE1 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
Lmcd1Q8VEE1 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Lmcd1Q8VEE1 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Lmcd1Q8VEE1 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Lmcd1Q8VEE1 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Lmcd1Q8VEE1 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Lmcd1Q8VEE1 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC22.53■■□□□ 1.2
Lmcd1Q8VEE1 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC22.52■■□□□ 1.2
Lmcd1Q8VEE1 Gm7160-202ENSMUST00000188519 1027 ntBASIC22.52■■□□□ 1.2
Lmcd1Q8VEE1 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Lmcd1Q8VEE1 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Lmcd1Q8VEE1 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
Lmcd1Q8VEE1 AC122428.3-201ENSMUST00000215551 2290 ntBASIC22.52■■□□□ 1.2
Lmcd1Q8VEE1 Gm10129-202ENSMUST00000193100 1316 ntBASIC22.52■■□□□ 1.2
Lmcd1Q8VEE1 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Lmcd1Q8VEE1 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
Lmcd1Q8VEE1 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Lmcd1Q8VEE1 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Lmcd1Q8VEE1 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Lmcd1Q8VEE1 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC22.51■■□□□ 1.19
Lmcd1Q8VEE1 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC22.51■■□□□ 1.19
Lmcd1Q8VEE1 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Lmcd1Q8VEE1 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Lmcd1Q8VEE1 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Lmcd1Q8VEE1 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
Lmcd1Q8VEE1 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Lmcd1Q8VEE1 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC22.5■■□□□ 1.19
Lmcd1Q8VEE1 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Lmcd1Q8VEE1 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Lmcd1Q8VEE1 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC22.49■■□□□ 1.19
Lmcd1Q8VEE1 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Lmcd1Q8VEE1 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Lmcd1Q8VEE1 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC22.49■■□□□ 1.19
Lmcd1Q8VEE1 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Lmcd1Q8VEE1 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Lmcd1Q8VEE1 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC22.49■■□□□ 1.19
Lmcd1Q8VEE1 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Lmcd1Q8VEE1 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC22.48■■□□□ 1.19
Lmcd1Q8VEE1 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC22.48■■□□□ 1.19
Lmcd1Q8VEE1 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Lmcd1Q8VEE1 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Lmcd1Q8VEE1 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Lmcd1Q8VEE1 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Lmcd1Q8VEE1 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC22.48■■□□□ 1.19
Lmcd1Q8VEE1 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Lmcd1Q8VEE1 Gm12669-201ENSMUST00000122162 1009 ntBASIC22.47■■□□□ 1.19
Lmcd1Q8VEE1 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Lmcd1Q8VEE1 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Lmcd1Q8VEE1 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Lmcd1Q8VEE1 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
Lmcd1Q8VEE1 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC22.46■■□□□ 1.19
Lmcd1Q8VEE1 Spcs1-204ENSMUST00000226782 949 ntBASIC22.46■■□□□ 1.19
Lmcd1Q8VEE1 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Lmcd1Q8VEE1 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
Lmcd1Q8VEE1 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
Lmcd1Q8VEE1 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Lmcd1Q8VEE1 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.19
Lmcd1Q8VEE1 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Lmcd1Q8VEE1 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC22.45■■□□□ 1.18
Lmcd1Q8VEE1 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC22.44■■□□□ 1.18
Lmcd1Q8VEE1 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC22.44■■□□□ 1.18
Lmcd1Q8VEE1 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC22.44■■□□□ 1.18
Lmcd1Q8VEE1 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC22.44■■□□□ 1.18
Lmcd1Q8VEE1 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Lmcd1Q8VEE1 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC22.44■■□□□ 1.18
Lmcd1Q8VEE1 Gm6085-201ENSMUST00000182774 1470 ntBASIC22.44■■□□□ 1.18
Lmcd1Q8VEE1 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
Lmcd1Q8VEE1 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
Lmcd1Q8VEE1 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC22.43■■□□□ 1.18
Lmcd1Q8VEE1 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Lmcd1Q8VEE1 Gm18671-201ENSMUST00000214826 683 ntBASIC22.43■■□□□ 1.18
Lmcd1Q8VEE1 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Lmcd1Q8VEE1 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC22.42■■□□□ 1.18
Retrieved 100 of 76,532 protein–RNA pairs in 13.6 ms