Protein–RNA interactions for Protein: Q8VDB9

Slc6a20a, Sodium- and chloride-dependent transporter XTRP3A, mousemouse

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a20aQ8VDB9 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.9
Slc6a20aQ8VDB9 Gm8093-201ENSMUST00000128935 1892 ntBASIC20.64■□□□□ 0.9
Slc6a20aQ8VDB9 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC20.64■□□□□ 0.89
Slc6a20aQ8VDB9 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Slc6a20aQ8VDB9 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Slc6a20aQ8VDB9 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Slc6a20aQ8VDB9 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC20.64■□□□□ 0.89
Slc6a20aQ8VDB9 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC20.64■□□□□ 0.89
Slc6a20aQ8VDB9 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Slc6a20aQ8VDB9 Kdm3b-204ENSMUST00000224715 2032 ntBASIC20.63■□□□□ 0.89
Slc6a20aQ8VDB9 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Slc6a20aQ8VDB9 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Slc6a20aQ8VDB9 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Slc6a20aQ8VDB9 Gm45444-201ENSMUST00000211394 898 ntBASIC20.63■□□□□ 0.89
Slc6a20aQ8VDB9 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
Slc6a20aQ8VDB9 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
Slc6a20aQ8VDB9 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Slc6a20aQ8VDB9 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Slc6a20aQ8VDB9 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Slc6a20aQ8VDB9 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Slc6a20aQ8VDB9 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.62■□□□□ 0.89
Slc6a20aQ8VDB9 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Slc6a20aQ8VDB9 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Slc6a20aQ8VDB9 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Slc6a20aQ8VDB9 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Slc6a20aQ8VDB9 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Slc6a20aQ8VDB9 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Slc6a20aQ8VDB9 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Slc6a20aQ8VDB9 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC20.62■□□□□ 0.89
Slc6a20aQ8VDB9 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Slc6a20aQ8VDB9 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Slc6a20aQ8VDB9 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Slc6a20aQ8VDB9 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.61■□□□□ 0.89
Slc6a20aQ8VDB9 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Slc6a20aQ8VDB9 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Slc6a20aQ8VDB9 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Slc6a20aQ8VDB9 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Slc6a20aQ8VDB9 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Slc6a20aQ8VDB9 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Slc6a20aQ8VDB9 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Slc6a20aQ8VDB9 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Slc6a20aQ8VDB9 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Slc6a20aQ8VDB9 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Slc6a20aQ8VDB9 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Slc6a20aQ8VDB9 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Slc6a20aQ8VDB9 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC20.6■□□□□ 0.89
Slc6a20aQ8VDB9 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Slc6a20aQ8VDB9 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Slc6a20aQ8VDB9 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Slc6a20aQ8VDB9 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC20.59■□□□□ 0.89
Slc6a20aQ8VDB9 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Slc6a20aQ8VDB9 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
Slc6a20aQ8VDB9 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Slc6a20aQ8VDB9 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Slc6a20aQ8VDB9 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Slc6a20aQ8VDB9 Gm13238-201ENSMUST00000117655 780 ntBASIC20.58■□□□□ 0.89
Slc6a20aQ8VDB9 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Slc6a20aQ8VDB9 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Slc6a20aQ8VDB9 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC20.57■□□□□ 0.88
Slc6a20aQ8VDB9 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Slc6a20aQ8VDB9 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Slc6a20aQ8VDB9 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
Slc6a20aQ8VDB9 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Slc6a20aQ8VDB9 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC20.57■□□□□ 0.88
Slc6a20aQ8VDB9 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Slc6a20aQ8VDB9 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Slc6a20aQ8VDB9 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Slc6a20aQ8VDB9 Gm5921-201ENSMUST00000075898 882 ntBASIC20.57■□□□□ 0.88
Slc6a20aQ8VDB9 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Slc6a20aQ8VDB9 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Slc6a20aQ8VDB9 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
Slc6a20aQ8VDB9 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Slc6a20aQ8VDB9 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Slc6a20aQ8VDB9 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Slc6a20aQ8VDB9 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Slc6a20aQ8VDB9 Gm44949-201ENSMUST00000206423 1450 ntBASIC20.56■□□□□ 0.88
Slc6a20aQ8VDB9 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Slc6a20aQ8VDB9 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Slc6a20aQ8VDB9 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Slc6a20aQ8VDB9 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC20.55■□□□□ 0.88
Slc6a20aQ8VDB9 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Slc6a20aQ8VDB9 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
Slc6a20aQ8VDB9 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Slc6a20aQ8VDB9 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Slc6a20aQ8VDB9 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Slc6a20aQ8VDB9 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Slc6a20aQ8VDB9 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Slc6a20aQ8VDB9 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Slc6a20aQ8VDB9 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Slc6a20aQ8VDB9 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC20.53■□□□□ 0.88
Slc6a20aQ8VDB9 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.53■□□□□ 0.88
Slc6a20aQ8VDB9 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC20.53■□□□□ 0.88
Slc6a20aQ8VDB9 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Slc6a20aQ8VDB9 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC20.53■□□□□ 0.88
Slc6a20aQ8VDB9 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Slc6a20aQ8VDB9 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Slc6a20aQ8VDB9 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Slc6a20aQ8VDB9 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Slc6a20aQ8VDB9 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Slc6a20aQ8VDB9 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 58.7 ms