Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ndc1Q8VCB1 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Ndc1Q8VCB1 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ndc1Q8VCB1 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ndc1Q8VCB1 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC19.7■□□□□ 0.74
Ndc1Q8VCB1 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Ndc1Q8VCB1 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC19.7■□□□□ 0.74
Ndc1Q8VCB1 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ndc1Q8VCB1 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ndc1Q8VCB1 Gm13042-201ENSMUST00000119244 1955 ntBASIC19.69■□□□□ 0.74
Ndc1Q8VCB1 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ndc1Q8VCB1 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ndc1Q8VCB1 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ndc1Q8VCB1 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ndc1Q8VCB1 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ndc1Q8VCB1 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Ndc1Q8VCB1 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ndc1Q8VCB1 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ndc1Q8VCB1 Gm10620-201ENSMUST00000098379 1332 ntBASIC19.68■□□□□ 0.74
Ndc1Q8VCB1 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Ndc1Q8VCB1 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ndc1Q8VCB1 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.68■□□□□ 0.74
Ndc1Q8VCB1 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ndc1Q8VCB1 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC19.67■□□□□ 0.74
Ndc1Q8VCB1 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Ndc1Q8VCB1 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Ndc1Q8VCB1 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ndc1Q8VCB1 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ndc1Q8VCB1 Dmtn-209ENSMUST00000228295 2572 ntBASIC19.67■□□□□ 0.74
Ndc1Q8VCB1 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Ndc1Q8VCB1 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ndc1Q8VCB1 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Ndc1Q8VCB1 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ndc1Q8VCB1 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ndc1Q8VCB1 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Ndc1Q8VCB1 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Ndc1Q8VCB1 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC19.66■□□□□ 0.74
Ndc1Q8VCB1 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ndc1Q8VCB1 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC19.66■□□□□ 0.74
Ndc1Q8VCB1 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ndc1Q8VCB1 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ndc1Q8VCB1 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC19.66■□□□□ 0.74
Ndc1Q8VCB1 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Ndc1Q8VCB1 Gm26766-202ENSMUST00000227544 2347 ntBASIC19.65■□□□□ 0.74
Ndc1Q8VCB1 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC19.65■□□□□ 0.74
Ndc1Q8VCB1 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ndc1Q8VCB1 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Ndc1Q8VCB1 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Ndc1Q8VCB1 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ndc1Q8VCB1 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Ndc1Q8VCB1 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Ndc1Q8VCB1 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC19.64■□□□□ 0.73
Ndc1Q8VCB1 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC19.64■□□□□ 0.73
Ndc1Q8VCB1 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ndc1Q8VCB1 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ndc1Q8VCB1 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC19.64■□□□□ 0.73
Ndc1Q8VCB1 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Ndc1Q8VCB1 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ndc1Q8VCB1 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ndc1Q8VCB1 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ndc1Q8VCB1 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Ndc1Q8VCB1 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Ndc1Q8VCB1 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC19.63■□□□□ 0.73
Ndc1Q8VCB1 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ndc1Q8VCB1 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ndc1Q8VCB1 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Ndc1Q8VCB1 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ndc1Q8VCB1 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ndc1Q8VCB1 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ndc1Q8VCB1 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ndc1Q8VCB1 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Ndc1Q8VCB1 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ndc1Q8VCB1 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Ndc1Q8VCB1 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ndc1Q8VCB1 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ndc1Q8VCB1 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ndc1Q8VCB1 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ndc1Q8VCB1 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Ndc1Q8VCB1 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC19.62■□□□□ 0.73
Ndc1Q8VCB1 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ndc1Q8VCB1 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
Ndc1Q8VCB1 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Ndc1Q8VCB1 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ndc1Q8VCB1 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC19.61■□□□□ 0.73
Ndc1Q8VCB1 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ndc1Q8VCB1 Gm9847-201ENSMUST00000052528 599 ntBASIC19.61■□□□□ 0.73
Ndc1Q8VCB1 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC19.61■□□□□ 0.73
Ndc1Q8VCB1 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Ndc1Q8VCB1 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ndc1Q8VCB1 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ndc1Q8VCB1 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Ndc1Q8VCB1 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ndc1Q8VCB1 Gm13241-201ENSMUST00000094493 780 ntBASIC19.6■□□□□ 0.73
Ndc1Q8VCB1 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ndc1Q8VCB1 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ndc1Q8VCB1 AC158990.1-201ENSMUST00000221450 2016 ntBASIC19.59■□□□□ 0.73
Ndc1Q8VCB1 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ndc1Q8VCB1 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ndc1Q8VCB1 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC19.59■□□□□ 0.73
Ndc1Q8VCB1 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 10.8 ms