Protein–RNA interactions for Protein: Q8VC97

Upb1, Beta-ureidopropionase, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upb1Q8VC97 Gm42418-201ENSMUST00000182010 1831 ntBASIC22.8■■□□□ 1.24
Upb1Q8VC97 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC22.8■■□□□ 1.24
Upb1Q8VC97 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Upb1Q8VC97 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC22.8■■□□□ 1.24
Upb1Q8VC97 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC22.8■■□□□ 1.24
Upb1Q8VC97 Gm9847-201ENSMUST00000052528 599 ntBASIC22.8■■□□□ 1.24
Upb1Q8VC97 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Upb1Q8VC97 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Upb1Q8VC97 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC22.8■■□□□ 1.24
Upb1Q8VC97 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Upb1Q8VC97 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC22.79■■□□□ 1.24
Upb1Q8VC97 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Upb1Q8VC97 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Upb1Q8VC97 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC22.79■■□□□ 1.24
Upb1Q8VC97 Gm12922-201ENSMUST00000120626 809 ntBASIC22.79■■□□□ 1.24
Upb1Q8VC97 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
Upb1Q8VC97 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Upb1Q8VC97 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC22.79■■□□□ 1.24
Upb1Q8VC97 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC22.79■■□□□ 1.24
Upb1Q8VC97 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC22.79■■□□□ 1.24
Upb1Q8VC97 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC22.78■■□□□ 1.24
Upb1Q8VC97 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Upb1Q8VC97 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Upb1Q8VC97 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
Upb1Q8VC97 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC22.78■■□□□ 1.24
Upb1Q8VC97 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC22.78■■□□□ 1.24
Upb1Q8VC97 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC22.78■■□□□ 1.24
Upb1Q8VC97 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
Upb1Q8VC97 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Upb1Q8VC97 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC22.77■■□□□ 1.24
Upb1Q8VC97 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC22.77■■□□□ 1.24
Upb1Q8VC97 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Upb1Q8VC97 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Upb1Q8VC97 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC22.77■■□□□ 1.24
Upb1Q8VC97 Gm13241-201ENSMUST00000094493 780 ntBASIC22.77■■□□□ 1.24
Upb1Q8VC97 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Upb1Q8VC97 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC22.77■■□□□ 1.24
Upb1Q8VC97 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.23
Upb1Q8VC97 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC22.76■■□□□ 1.23
Upb1Q8VC97 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Upb1Q8VC97 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Upb1Q8VC97 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
Upb1Q8VC97 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Upb1Q8VC97 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC22.76■■□□□ 1.23
Upb1Q8VC97 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC22.76■■□□□ 1.23
Upb1Q8VC97 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
Upb1Q8VC97 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
Upb1Q8VC97 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC22.75■■□□□ 1.23
Upb1Q8VC97 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Upb1Q8VC97 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Upb1Q8VC97 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Upb1Q8VC97 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC22.74■■□□□ 1.23
Upb1Q8VC97 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Upb1Q8VC97 Gm4430-201ENSMUST00000192413 1943 ntBASIC22.74■■□□□ 1.23
Upb1Q8VC97 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Upb1Q8VC97 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Upb1Q8VC97 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.23
Upb1Q8VC97 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC22.73■■□□□ 1.23
Upb1Q8VC97 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Upb1Q8VC97 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC22.73■■□□□ 1.23
Upb1Q8VC97 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC22.73■■□□□ 1.23
Upb1Q8VC97 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Upb1Q8VC97 Kdm3b-204ENSMUST00000224715 2032 ntBASIC22.72■■□□□ 1.23
Upb1Q8VC97 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC22.72■■□□□ 1.23
Upb1Q8VC97 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC22.72■■□□□ 1.23
Upb1Q8VC97 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC22.72■■□□□ 1.23
Upb1Q8VC97 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC22.72■■□□□ 1.23
Upb1Q8VC97 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC22.72■■□□□ 1.23
Upb1Q8VC97 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Upb1Q8VC97 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Upb1Q8VC97 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC22.71■■□□□ 1.23
Upb1Q8VC97 AC164883.3-201ENSMUST00000227396 1774 ntBASIC22.71■■□□□ 1.23
Upb1Q8VC97 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Upb1Q8VC97 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC22.7■■□□□ 1.23
Upb1Q8VC97 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Upb1Q8VC97 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC22.7■■□□□ 1.22
Upb1Q8VC97 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC22.7■■□□□ 1.22
Upb1Q8VC97 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC22.7■■□□□ 1.22
Upb1Q8VC97 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Upb1Q8VC97 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Upb1Q8VC97 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC22.7■■□□□ 1.22
Upb1Q8VC97 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Upb1Q8VC97 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Upb1Q8VC97 Gm43034-201ENSMUST00000198678 1364 ntBASIC22.69■■□□□ 1.22
Upb1Q8VC97 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC22.69■■□□□ 1.22
Upb1Q8VC97 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Upb1Q8VC97 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Upb1Q8VC97 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Upb1Q8VC97 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC22.68■■□□□ 1.22
Upb1Q8VC97 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC22.68■■□□□ 1.22
Upb1Q8VC97 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC22.68■■□□□ 1.22
Upb1Q8VC97 Gm9870-201ENSMUST00000063874 645 ntBASIC22.68■■□□□ 1.22
Upb1Q8VC97 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Upb1Q8VC97 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC22.68■■□□□ 1.22
Upb1Q8VC97 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Upb1Q8VC97 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC22.67■■□□□ 1.22
Upb1Q8VC97 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Upb1Q8VC97 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Upb1Q8VC97 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC22.66■■□□□ 1.22
Upb1Q8VC97 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms