Protein–RNA interactions for Protein: Q8R550

Sh3kbp1, SH3 domain-containing kinase-binding protein 1, mousemouse

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3kbp1Q8R550 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
Sh3kbp1Q8R550 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC21.52■■□□□ 1.03
Sh3kbp1Q8R550 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
Sh3kbp1Q8R550 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Sh3kbp1Q8R550 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC21.51■■□□□ 1.03
Sh3kbp1Q8R550 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Sh3kbp1Q8R550 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Sh3kbp1Q8R550 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Sh3kbp1Q8R550 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC21.5■■□□□ 1.03
Sh3kbp1Q8R550 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Sh3kbp1Q8R550 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Sh3kbp1Q8R550 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Sh3kbp1Q8R550 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC21.5■■□□□ 1.03
Sh3kbp1Q8R550 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Sh3kbp1Q8R550 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Sh3kbp1Q8R550 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Sh3kbp1Q8R550 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Sh3kbp1Q8R550 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Sh3kbp1Q8R550 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Sh3kbp1Q8R550 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Sh3kbp1Q8R550 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
Sh3kbp1Q8R550 Gm11847-201ENSMUST00000125165 1119 ntBASIC21.49■■□□□ 1.03
Sh3kbp1Q8R550 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC21.49■■□□□ 1.03
Sh3kbp1Q8R550 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC21.49■■□□□ 1.03
Sh3kbp1Q8R550 Gm40881-201ENSMUST00000223397 166 ntBASIC21.49■■□□□ 1.03
Sh3kbp1Q8R550 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Sh3kbp1Q8R550 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC21.49■■□□□ 1.03
Sh3kbp1Q8R550 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC21.49■■□□□ 1.03
Sh3kbp1Q8R550 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Sh3kbp1Q8R550 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Sh3kbp1Q8R550 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Sh3kbp1Q8R550 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Sh3kbp1Q8R550 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Sh3kbp1Q8R550 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC21.48■■□□□ 1.03
Sh3kbp1Q8R550 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC21.48■■□□□ 1.03
Sh3kbp1Q8R550 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Sh3kbp1Q8R550 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Sh3kbp1Q8R550 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Sh3kbp1Q8R550 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC21.47■■□□□ 1.03
Sh3kbp1Q8R550 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
Sh3kbp1Q8R550 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Sh3kbp1Q8R550 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
Sh3kbp1Q8R550 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Sh3kbp1Q8R550 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC21.46■■□□□ 1.03
Sh3kbp1Q8R550 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Sh3kbp1Q8R550 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Sh3kbp1Q8R550 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Sh3kbp1Q8R550 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Sh3kbp1Q8R550 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Sh3kbp1Q8R550 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
Sh3kbp1Q8R550 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Sh3kbp1Q8R550 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Sh3kbp1Q8R550 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Sh3kbp1Q8R550 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
Sh3kbp1Q8R550 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
Sh3kbp1Q8R550 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Sh3kbp1Q8R550 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Sh3kbp1Q8R550 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC21.45■■□□□ 1.02
Sh3kbp1Q8R550 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
Sh3kbp1Q8R550 Gm22238-201ENSMUST00000175222 88 ntBASIC21.45■■□□□ 1.02
Sh3kbp1Q8R550 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Sh3kbp1Q8R550 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Sh3kbp1Q8R550 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Sh3kbp1Q8R550 Gm8093-201ENSMUST00000128935 1892 ntBASIC21.45■■□□□ 1.02
Sh3kbp1Q8R550 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Sh3kbp1Q8R550 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Sh3kbp1Q8R550 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Sh3kbp1Q8R550 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC21.44■■□□□ 1.02
Sh3kbp1Q8R550 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Sh3kbp1Q8R550 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Sh3kbp1Q8R550 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Sh3kbp1Q8R550 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC21.44■■□□□ 1.02
Sh3kbp1Q8R550 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Sh3kbp1Q8R550 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Sh3kbp1Q8R550 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC21.43■■□□□ 1.02
Sh3kbp1Q8R550 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Sh3kbp1Q8R550 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Sh3kbp1Q8R550 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC21.43■■□□□ 1.02
Sh3kbp1Q8R550 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC21.42■■□□□ 1.02
Sh3kbp1Q8R550 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Sh3kbp1Q8R550 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Sh3kbp1Q8R550 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
Sh3kbp1Q8R550 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Sh3kbp1Q8R550 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
Sh3kbp1Q8R550 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Sh3kbp1Q8R550 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Sh3kbp1Q8R550 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
Sh3kbp1Q8R550 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Sh3kbp1Q8R550 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Sh3kbp1Q8R550 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Sh3kbp1Q8R550 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Sh3kbp1Q8R550 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Sh3kbp1Q8R550 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Sh3kbp1Q8R550 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
Sh3kbp1Q8R550 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Sh3kbp1Q8R550 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Sh3kbp1Q8R550 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Sh3kbp1Q8R550 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Sh3kbp1Q8R550 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Sh3kbp1Q8R550 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms