Protein–RNA interactions for Protein: Q8R480

Nup85, Nuclear pore complex protein Nup85, mousemouse

Known RBP Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup85Q8R480 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.02
Nup85Q8R480 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Nup85Q8R480 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Nup85Q8R480 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Nup85Q8R480 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC21.39■■□□□ 1.01
Nup85Q8R480 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Nup85Q8R480 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Nup85Q8R480 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Nup85Q8R480 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Nup85Q8R480 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Nup85Q8R480 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC21.38■■□□□ 1.01
Nup85Q8R480 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Nup85Q8R480 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Nup85Q8R480 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
Nup85Q8R480 Gm38160-201ENSMUST00000193090 2499 ntBASIC21.37■■□□□ 1.01
Nup85Q8R480 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Nup85Q8R480 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Nup85Q8R480 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC21.37■■□□□ 1.01
Nup85Q8R480 Gm11847-201ENSMUST00000125165 1119 ntBASIC21.37■■□□□ 1.01
Nup85Q8R480 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Nup85Q8R480 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC21.37■■□□□ 1.01
Nup85Q8R480 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC21.37■■□□□ 1.01
Nup85Q8R480 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC21.37■■□□□ 1.01
Nup85Q8R480 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC21.37■■□□□ 1.01
Nup85Q8R480 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Nup85Q8R480 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Nup85Q8R480 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Nup85Q8R480 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
Nup85Q8R480 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Nup85Q8R480 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
Nup85Q8R480 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Nup85Q8R480 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Nup85Q8R480 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Nup85Q8R480 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Nup85Q8R480 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Nup85Q8R480 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC21.35■■□□□ 1.01
Nup85Q8R480 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Nup85Q8R480 Gm37415-201ENSMUST00000192265 2054 ntBASIC21.35■■□□□ 1.01
Nup85Q8R480 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC21.35■■□□□ 1.01
Nup85Q8R480 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Nup85Q8R480 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Nup85Q8R480 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC21.35■■□□□ 1.01
Nup85Q8R480 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Nup85Q8R480 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Nup85Q8R480 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Nup85Q8R480 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Nup85Q8R480 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Nup85Q8R480 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC21.34■■□□□ 1.01
Nup85Q8R480 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC21.34■■□□□ 1.01
Nup85Q8R480 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC21.34■■□□□ 1.01
Nup85Q8R480 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC21.34■■□□□ 1.01
Nup85Q8R480 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Nup85Q8R480 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Nup85Q8R480 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC21.33■■□□□ 1.01
Nup85Q8R480 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
Nup85Q8R480 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Nup85Q8R480 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1
Nup85Q8R480 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC21.32■■□□□ 1
Nup85Q8R480 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Nup85Q8R480 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Nup85Q8R480 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Nup85Q8R480 Etf1-202ENSMUST00000180351 108 ntBASIC21.32■■□□□ 1
Nup85Q8R480 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
Nup85Q8R480 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC21.31■■□□□ 1
Nup85Q8R480 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC21.31■■□□□ 1
Nup85Q8R480 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC21.31■■□□□ 1
Nup85Q8R480 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Nup85Q8R480 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC21.31■■□□□ 1
Nup85Q8R480 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC21.31■■□□□ 1
Nup85Q8R480 Gm5131-201ENSMUST00000212776 1238 ntBASIC21.31■■□□□ 1
Nup85Q8R480 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC21.31■■□□□ 1
Nup85Q8R480 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Nup85Q8R480 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Nup85Q8R480 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Nup85Q8R480 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC21.31■■□□□ 1
Nup85Q8R480 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Nup85Q8R480 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC21.3■■□□□ 1
Nup85Q8R480 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC21.3■■□□□ 1
Nup85Q8R480 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC21.3■■□□□ 1
Nup85Q8R480 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Nup85Q8R480 AC158990.1-201ENSMUST00000221450 2016 ntBASIC21.3■■□□□ 1
Nup85Q8R480 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC21.3■■□□□ 1
Nup85Q8R480 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Nup85Q8R480 Gm8093-201ENSMUST00000128935 1892 ntBASIC21.29■■□□□ 1
Nup85Q8R480 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Nup85Q8R480 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Nup85Q8R480 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC21.29■■□□□ 1
Nup85Q8R480 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC21.29■■□□□ 1
Nup85Q8R480 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Nup85Q8R480 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC21.29■■□□□ 1
Nup85Q8R480 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC21.28■■□□□ 1
Nup85Q8R480 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC21.28■■□□□ 1
Nup85Q8R480 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Nup85Q8R480 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Nup85Q8R480 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC21.27■■□□□ 1
Nup85Q8R480 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
Nup85Q8R480 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Nup85Q8R480 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Nup85Q8R480 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC21.27■■□□□ 1
Nup85Q8R480 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC21.27■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms