Protein–RNA interactions for Protein: Q8R429

Atp2a1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp2a1Q8R429 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Atp2a1Q8R429 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC23.43■■□□□ 1.34
Atp2a1Q8R429 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC23.43■■□□□ 1.34
Atp2a1Q8R429 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Atp2a1Q8R429 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC23.43■■□□□ 1.34
Atp2a1Q8R429 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC23.43■■□□□ 1.34
Atp2a1Q8R429 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC23.43■■□□□ 1.34
Atp2a1Q8R429 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Atp2a1Q8R429 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Atp2a1Q8R429 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
Atp2a1Q8R429 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC23.42■■□□□ 1.34
Atp2a1Q8R429 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC23.42■■□□□ 1.34
Atp2a1Q8R429 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Atp2a1Q8R429 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Atp2a1Q8R429 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Atp2a1Q8R429 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC23.41■■□□□ 1.34
Atp2a1Q8R429 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC23.41■■□□□ 1.34
Atp2a1Q8R429 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
Atp2a1Q8R429 Golgb1-201ENSMUST00000023534 498 ntBASIC23.41■■□□□ 1.34
Atp2a1Q8R429 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC23.41■■□□□ 1.34
Atp2a1Q8R429 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC23.41■■□□□ 1.34
Atp2a1Q8R429 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Atp2a1Q8R429 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC23.4■■□□□ 1.34
Atp2a1Q8R429 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC23.4■■□□□ 1.34
Atp2a1Q8R429 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC23.4■■□□□ 1.34
Atp2a1Q8R429 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Atp2a1Q8R429 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
Atp2a1Q8R429 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Atp2a1Q8R429 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC23.4■■□□□ 1.34
Atp2a1Q8R429 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC23.4■■□□□ 1.34
Atp2a1Q8R429 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Atp2a1Q8R429 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Atp2a1Q8R429 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
Atp2a1Q8R429 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Atp2a1Q8R429 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC23.39■■□□□ 1.34
Atp2a1Q8R429 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC23.39■■□□□ 1.33
Atp2a1Q8R429 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC23.39■■□□□ 1.33
Atp2a1Q8R429 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC23.39■■□□□ 1.33
Atp2a1Q8R429 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Atp2a1Q8R429 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Atp2a1Q8R429 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC23.38■■□□□ 1.33
Atp2a1Q8R429 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Atp2a1Q8R429 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC23.38■■□□□ 1.33
Atp2a1Q8R429 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Atp2a1Q8R429 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Atp2a1Q8R429 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC23.38■■□□□ 1.33
Atp2a1Q8R429 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC23.37■■□□□ 1.33
Atp2a1Q8R429 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
Atp2a1Q8R429 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
Atp2a1Q8R429 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Atp2a1Q8R429 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Atp2a1Q8R429 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Atp2a1Q8R429 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC23.37■■□□□ 1.33
Atp2a1Q8R429 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Atp2a1Q8R429 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Atp2a1Q8R429 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Atp2a1Q8R429 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
Atp2a1Q8R429 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
Atp2a1Q8R429 AC140930.3-201ENSMUST00000222935 274 ntBASIC23.36■■□□□ 1.33
Atp2a1Q8R429 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Atp2a1Q8R429 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC23.36■■□□□ 1.33
Atp2a1Q8R429 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC23.36■■□□□ 1.33
Atp2a1Q8R429 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC23.35■■□□□ 1.33
Atp2a1Q8R429 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Atp2a1Q8R429 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Atp2a1Q8R429 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Atp2a1Q8R429 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
Atp2a1Q8R429 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
Atp2a1Q8R429 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Atp2a1Q8R429 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC23.34■■□□□ 1.33
Atp2a1Q8R429 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.33
Atp2a1Q8R429 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC23.33■■□□□ 1.33
Atp2a1Q8R429 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Atp2a1Q8R429 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.33
Atp2a1Q8R429 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC23.33■■□□□ 1.33
Atp2a1Q8R429 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Atp2a1Q8R429 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
Atp2a1Q8R429 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC23.33■■□□□ 1.32
Atp2a1Q8R429 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Atp2a1Q8R429 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Atp2a1Q8R429 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC23.32■■□□□ 1.32
Atp2a1Q8R429 Appbp2os-202ENSMUST00000206972 447 ntBASIC23.32■■□□□ 1.32
Atp2a1Q8R429 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Atp2a1Q8R429 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Atp2a1Q8R429 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Atp2a1Q8R429 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Atp2a1Q8R429 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
Atp2a1Q8R429 Gm12821-201ENSMUST00000120022 600 ntBASIC23.3■■□□□ 1.32
Atp2a1Q8R429 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Atp2a1Q8R429 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
Atp2a1Q8R429 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
Atp2a1Q8R429 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Atp2a1Q8R429 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Atp2a1Q8R429 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
Atp2a1Q8R429 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Atp2a1Q8R429 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Atp2a1Q8R429 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Atp2a1Q8R429 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
Atp2a1Q8R429 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Atp2a1Q8R429 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms