Protein–RNA interactions for Protein: Q8R2G6

Ccdc80, Coiled-coil domain-containing protein 80, mousemouse

Predictions only

Length 949 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc80Q8R2G6 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ccdc80Q8R2G6 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC20.27■□□□□ 0.84
Ccdc80Q8R2G6 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC20.27■□□□□ 0.84
Ccdc80Q8R2G6 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ccdc80Q8R2G6 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Ccdc80Q8R2G6 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Ccdc80Q8R2G6 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Ccdc80Q8R2G6 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
Ccdc80Q8R2G6 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ccdc80Q8R2G6 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ccdc80Q8R2G6 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC20.26■□□□□ 0.83
Ccdc80Q8R2G6 Gm7432-201ENSMUST00000210343 879 ntBASIC20.26■□□□□ 0.83
Ccdc80Q8R2G6 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Ccdc80Q8R2G6 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ccdc80Q8R2G6 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ccdc80Q8R2G6 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Ccdc80Q8R2G6 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ccdc80Q8R2G6 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ccdc80Q8R2G6 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ccdc80Q8R2G6 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Ccdc80Q8R2G6 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Ccdc80Q8R2G6 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC20.24■□□□□ 0.83
Ccdc80Q8R2G6 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ccdc80Q8R2G6 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Ccdc80Q8R2G6 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ccdc80Q8R2G6 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ccdc80Q8R2G6 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC20.23■□□□□ 0.83
Ccdc80Q8R2G6 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Ccdc80Q8R2G6 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Ccdc80Q8R2G6 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC20.23■□□□□ 0.83
Ccdc80Q8R2G6 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC20.23■□□□□ 0.83
Ccdc80Q8R2G6 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ccdc80Q8R2G6 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ccdc80Q8R2G6 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC20.22■□□□□ 0.83
Ccdc80Q8R2G6 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Ccdc80Q8R2G6 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Ccdc80Q8R2G6 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ccdc80Q8R2G6 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Ccdc80Q8R2G6 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ccdc80Q8R2G6 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ccdc80Q8R2G6 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ccdc80Q8R2G6 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Ccdc80Q8R2G6 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ccdc80Q8R2G6 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ccdc80Q8R2G6 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ccdc80Q8R2G6 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ccdc80Q8R2G6 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ccdc80Q8R2G6 Gm11599-201ENSMUST00000118720 878 ntBASIC20.2■□□□□ 0.82
Ccdc80Q8R2G6 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Ccdc80Q8R2G6 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Ccdc80Q8R2G6 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ccdc80Q8R2G6 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Ccdc80Q8R2G6 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Ccdc80Q8R2G6 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ccdc80Q8R2G6 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Ccdc80Q8R2G6 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ccdc80Q8R2G6 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ccdc80Q8R2G6 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Ccdc80Q8R2G6 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ccdc80Q8R2G6 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ccdc80Q8R2G6 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Ccdc80Q8R2G6 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Ccdc80Q8R2G6 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC20.18■□□□□ 0.82
Ccdc80Q8R2G6 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ccdc80Q8R2G6 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ccdc80Q8R2G6 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ccdc80Q8R2G6 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ccdc80Q8R2G6 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ccdc80Q8R2G6 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Ccdc80Q8R2G6 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ccdc80Q8R2G6 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
Ccdc80Q8R2G6 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ccdc80Q8R2G6 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ccdc80Q8R2G6 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ccdc80Q8R2G6 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Ccdc80Q8R2G6 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Ccdc80Q8R2G6 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC20.16■□□□□ 0.82
Ccdc80Q8R2G6 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Ccdc80Q8R2G6 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Ccdc80Q8R2G6 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ccdc80Q8R2G6 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ccdc80Q8R2G6 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC20.15■□□□□ 0.82
Ccdc80Q8R2G6 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ccdc80Q8R2G6 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ccdc80Q8R2G6 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ccdc80Q8R2G6 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ccdc80Q8R2G6 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ccdc80Q8R2G6 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Ccdc80Q8R2G6 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC20.15■□□□□ 0.82
Ccdc80Q8R2G6 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Ccdc80Q8R2G6 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
Ccdc80Q8R2G6 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ccdc80Q8R2G6 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Ccdc80Q8R2G6 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ccdc80Q8R2G6 Gm43545-201ENSMUST00000196765 2779 ntBASIC20.14■□□□□ 0.81
Ccdc80Q8R2G6 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Ccdc80Q8R2G6 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Ccdc80Q8R2G6 AC115037.1-201ENSMUST00000223391 2173 ntBASIC20.14■□□□□ 0.81
Ccdc80Q8R2G6 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Ccdc80Q8R2G6 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms