Protein–RNA interactions for Protein: Q8R1J3

Zcchc9, Zinc finger CCHC domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zcchc9Q8R1J3 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Zcchc9Q8R1J3 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Zcchc9Q8R1J3 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Zcchc9Q8R1J3 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Zcchc9Q8R1J3 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Zcchc9Q8R1J3 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Zcchc9Q8R1J3 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Zcchc9Q8R1J3 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Zcchc9Q8R1J3 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Zcchc9Q8R1J3 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Zcchc9Q8R1J3 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Zcchc9Q8R1J3 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Zcchc9Q8R1J3 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Zcchc9Q8R1J3 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20.82■□□□□ 0.92
Zcchc9Q8R1J3 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Zcchc9Q8R1J3 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Zcchc9Q8R1J3 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Zcchc9Q8R1J3 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Zcchc9Q8R1J3 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC20.81■□□□□ 0.92
Zcchc9Q8R1J3 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Zcchc9Q8R1J3 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Zcchc9Q8R1J3 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC20.81■□□□□ 0.92
Zcchc9Q8R1J3 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Zcchc9Q8R1J3 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC20.81■□□□□ 0.92
Zcchc9Q8R1J3 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC20.81■□□□□ 0.92
Zcchc9Q8R1J3 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC20.81■□□□□ 0.92
Zcchc9Q8R1J3 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Zcchc9Q8R1J3 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC20.81■□□□□ 0.92
Zcchc9Q8R1J3 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Zcchc9Q8R1J3 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Zcchc9Q8R1J3 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Zcchc9Q8R1J3 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Zcchc9Q8R1J3 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Zcchc9Q8R1J3 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Zcchc9Q8R1J3 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC20.8■□□□□ 0.92
Zcchc9Q8R1J3 Gm12821-201ENSMUST00000120022 600 ntBASIC20.8■□□□□ 0.92
Zcchc9Q8R1J3 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Zcchc9Q8R1J3 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Zcchc9Q8R1J3 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Zcchc9Q8R1J3 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Zcchc9Q8R1J3 Gm10620-201ENSMUST00000098379 1332 ntBASIC20.79■□□□□ 0.92
Zcchc9Q8R1J3 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC20.79■□□□□ 0.92
Zcchc9Q8R1J3 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC20.79■□□□□ 0.92
Zcchc9Q8R1J3 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Zcchc9Q8R1J3 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC20.79■□□□□ 0.92
Zcchc9Q8R1J3 Serp2-204ENSMUST00000228055 705 ntBASIC20.79■□□□□ 0.92
Zcchc9Q8R1J3 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Zcchc9Q8R1J3 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Zcchc9Q8R1J3 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Zcchc9Q8R1J3 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Zcchc9Q8R1J3 Gm27454-201ENSMUST00000185090 204 ntBASIC20.78■□□□□ 0.92
Zcchc9Q8R1J3 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC20.78■□□□□ 0.92
Zcchc9Q8R1J3 Golgb1-201ENSMUST00000023534 498 ntBASIC20.78■□□□□ 0.92
Zcchc9Q8R1J3 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Zcchc9Q8R1J3 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Zcchc9Q8R1J3 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Zcchc9Q8R1J3 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Zcchc9Q8R1J3 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Zcchc9Q8R1J3 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Zcchc9Q8R1J3 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Zcchc9Q8R1J3 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Zcchc9Q8R1J3 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Zcchc9Q8R1J3 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC20.76■□□□□ 0.91
Zcchc9Q8R1J3 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC20.76■□□□□ 0.91
Zcchc9Q8R1J3 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC20.76■□□□□ 0.91
Zcchc9Q8R1J3 Gm45417-201ENSMUST00000209533 758 ntBASIC20.76■□□□□ 0.91
Zcchc9Q8R1J3 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Zcchc9Q8R1J3 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Zcchc9Q8R1J3 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Zcchc9Q8R1J3 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Zcchc9Q8R1J3 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Zcchc9Q8R1J3 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Zcchc9Q8R1J3 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Zcchc9Q8R1J3 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
Zcchc9Q8R1J3 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Zcchc9Q8R1J3 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Zcchc9Q8R1J3 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Zcchc9Q8R1J3 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Zcchc9Q8R1J3 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Zcchc9Q8R1J3 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Zcchc9Q8R1J3 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Zcchc9Q8R1J3 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Zcchc9Q8R1J3 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Zcchc9Q8R1J3 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Zcchc9Q8R1J3 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Zcchc9Q8R1J3 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Zcchc9Q8R1J3 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC20.73■□□□□ 0.91
Zcchc9Q8R1J3 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC20.73■□□□□ 0.91
Zcchc9Q8R1J3 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC20.73■□□□□ 0.91
Zcchc9Q8R1J3 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC20.73■□□□□ 0.91
Zcchc9Q8R1J3 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Zcchc9Q8R1J3 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Zcchc9Q8R1J3 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Zcchc9Q8R1J3 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Zcchc9Q8R1J3 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Zcchc9Q8R1J3 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC20.72■□□□□ 0.91
Zcchc9Q8R1J3 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC20.72■□□□□ 0.91
Zcchc9Q8R1J3 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Zcchc9Q8R1J3 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Zcchc9Q8R1J3 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms