Protein–RNA interactions for Protein: Q8K558

Treml1, Trem-like transcript 1 protein, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Treml1Q8K558 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Treml1Q8K558 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Treml1Q8K558 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Treml1Q8K558 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Treml1Q8K558 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Treml1Q8K558 Gm10620-201ENSMUST00000098379 1332 ntBASIC20.62■□□□□ 0.89
Treml1Q8K558 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Treml1Q8K558 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Treml1Q8K558 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Treml1Q8K558 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC20.61■□□□□ 0.89
Treml1Q8K558 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC20.61■□□□□ 0.89
Treml1Q8K558 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC20.61■□□□□ 0.89
Treml1Q8K558 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Treml1Q8K558 Gm9959-201ENSMUST00000068277 390 ntBASIC20.61■□□□□ 0.89
Treml1Q8K558 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Treml1Q8K558 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Treml1Q8K558 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Treml1Q8K558 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Treml1Q8K558 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Treml1Q8K558 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC20.59■□□□□ 0.89
Treml1Q8K558 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC20.59■□□□□ 0.89
Treml1Q8K558 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Treml1Q8K558 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Treml1Q8K558 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Treml1Q8K558 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC20.59■□□□□ 0.89
Treml1Q8K558 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC20.59■□□□□ 0.89
Treml1Q8K558 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC20.59■□□□□ 0.89
Treml1Q8K558 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Treml1Q8K558 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
Treml1Q8K558 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Treml1Q8K558 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Treml1Q8K558 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC20.58■□□□□ 0.89
Treml1Q8K558 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Treml1Q8K558 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Treml1Q8K558 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
Treml1Q8K558 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Treml1Q8K558 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Treml1Q8K558 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Treml1Q8K558 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Treml1Q8K558 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Treml1Q8K558 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Treml1Q8K558 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Treml1Q8K558 Gm14117-201ENSMUST00000122417 843 ntBASIC20.56■□□□□ 0.88
Treml1Q8K558 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Treml1Q8K558 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.56■□□□□ 0.88
Treml1Q8K558 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC20.56■□□□□ 0.88
Treml1Q8K558 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Treml1Q8K558 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Treml1Q8K558 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Treml1Q8K558 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Treml1Q8K558 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Treml1Q8K558 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Treml1Q8K558 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Treml1Q8K558 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Treml1Q8K558 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Treml1Q8K558 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Treml1Q8K558 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Treml1Q8K558 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Treml1Q8K558 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Treml1Q8K558 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Treml1Q8K558 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC20.54■□□□□ 0.88
Treml1Q8K558 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Treml1Q8K558 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC20.54■□□□□ 0.88
Treml1Q8K558 Etf1-202ENSMUST00000180351 108 ntBASIC20.54■□□□□ 0.88
Treml1Q8K558 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC20.54■□□□□ 0.88
Treml1Q8K558 Gm5131-201ENSMUST00000212776 1238 ntBASIC20.54■□□□□ 0.88
Treml1Q8K558 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Treml1Q8K558 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Treml1Q8K558 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC20.53■□□□□ 0.88
Treml1Q8K558 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC20.53■□□□□ 0.88
Treml1Q8K558 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
Treml1Q8K558 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Treml1Q8K558 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Treml1Q8K558 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Treml1Q8K558 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Treml1Q8K558 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Treml1Q8K558 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Treml1Q8K558 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Treml1Q8K558 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Treml1Q8K558 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Treml1Q8K558 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Treml1Q8K558 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Treml1Q8K558 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Treml1Q8K558 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Treml1Q8K558 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC20.52■□□□□ 0.87
Treml1Q8K558 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Treml1Q8K558 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Treml1Q8K558 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Treml1Q8K558 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Treml1Q8K558 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Treml1Q8K558 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Treml1Q8K558 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Treml1Q8K558 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Treml1Q8K558 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC20.51■□□□□ 0.87
Treml1Q8K558 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC20.51■□□□□ 0.87
Treml1Q8K558 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC20.51■□□□□ 0.87
Treml1Q8K558 Gm12504-201ENSMUST00000120860 2231 ntBASIC20.51■□□□□ 0.87
Treml1Q8K558 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Treml1Q8K558 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Treml1Q8K558 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms