Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Gm32051-202ENSMUST00000197905 2385 ntBASIC19.75■□□□□ 0.75
Clrn1Q8K445 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Clrn1Q8K445 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
Clrn1Q8K445 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Clrn1Q8K445 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC19.74■□□□□ 0.75
Clrn1Q8K445 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC19.74■□□□□ 0.75
Clrn1Q8K445 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Clrn1Q8K445 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Clrn1Q8K445 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Clrn1Q8K445 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Clrn1Q8K445 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Clrn1Q8K445 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Clrn1Q8K445 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Clrn1Q8K445 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Clrn1Q8K445 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Clrn1Q8K445 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Clrn1Q8K445 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Clrn1Q8K445 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Clrn1Q8K445 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Clrn1Q8K445 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC19.72■□□□□ 0.75
Clrn1Q8K445 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Clrn1Q8K445 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Clrn1Q8K445 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Clrn1Q8K445 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Clrn1Q8K445 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Clrn1Q8K445 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Clrn1Q8K445 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Clrn1Q8K445 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC19.71■□□□□ 0.75
Clrn1Q8K445 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Clrn1Q8K445 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Clrn1Q8K445 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Clrn1Q8K445 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Clrn1Q8K445 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Clrn1Q8K445 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC19.71■□□□□ 0.75
Clrn1Q8K445 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Clrn1Q8K445 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Clrn1Q8K445 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Clrn1Q8K445 AC116713.1-201ENSMUST00000215074 430 ntBASIC19.7■□□□□ 0.74
Clrn1Q8K445 Gm10232-201ENSMUST00000089221 720 ntBASIC19.7■□□□□ 0.74
Clrn1Q8K445 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Clrn1Q8K445 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
Clrn1Q8K445 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
Clrn1Q8K445 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Clrn1Q8K445 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Clrn1Q8K445 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Clrn1Q8K445 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Clrn1Q8K445 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
Clrn1Q8K445 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Clrn1Q8K445 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC19.69■□□□□ 0.74
Clrn1Q8K445 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Clrn1Q8K445 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Clrn1Q8K445 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Clrn1Q8K445 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Clrn1Q8K445 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Clrn1Q8K445 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
Clrn1Q8K445 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Clrn1Q8K445 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Clrn1Q8K445 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Clrn1Q8K445 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC19.68■□□□□ 0.74
Clrn1Q8K445 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC19.67■□□□□ 0.74
Clrn1Q8K445 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Clrn1Q8K445 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Clrn1Q8K445 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Clrn1Q8K445 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Clrn1Q8K445 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Clrn1Q8K445 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Clrn1Q8K445 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Clrn1Q8K445 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Clrn1Q8K445 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Clrn1Q8K445 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Clrn1Q8K445 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Clrn1Q8K445 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Clrn1Q8K445 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Clrn1Q8K445 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Clrn1Q8K445 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Clrn1Q8K445 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC19.65■□□□□ 0.74
Clrn1Q8K445 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Clrn1Q8K445 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Clrn1Q8K445 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Clrn1Q8K445 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Clrn1Q8K445 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Clrn1Q8K445 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Clrn1Q8K445 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC19.64■□□□□ 0.73
Clrn1Q8K445 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Clrn1Q8K445 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Clrn1Q8K445 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Clrn1Q8K445 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC19.63■□□□□ 0.73
Clrn1Q8K445 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Clrn1Q8K445 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Clrn1Q8K445 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC19.63■□□□□ 0.73
Clrn1Q8K445 Gm15820-201ENSMUST00000201566 728 ntBASIC19.63■□□□□ 0.73
Clrn1Q8K445 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Clrn1Q8K445 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Clrn1Q8K445 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Clrn1Q8K445 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC19.62■□□□□ 0.73
Clrn1Q8K445 Gm5812-201ENSMUST00000061073 957 ntBASIC19.62■□□□□ 0.73
Clrn1Q8K445 AC164883.3-201ENSMUST00000227396 1774 ntBASIC19.62■□□□□ 0.73
Clrn1Q8K445 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Clrn1Q8K445 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Clrn1Q8K445 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 14 ms