Protein–RNA interactions for Protein: Q8K3Y3

Lin28a, Protein lin-28 homolog A, mousemouse

Known RBP Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lin28aQ8K3Y3 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Lin28aQ8K3Y3 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Lin28aQ8K3Y3 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC19.56■□□□□ 0.72
Lin28aQ8K3Y3 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Lin28aQ8K3Y3 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Lin28aQ8K3Y3 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Lin28aQ8K3Y3 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC19.55■□□□□ 0.72
Lin28aQ8K3Y3 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Lin28aQ8K3Y3 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC19.55■□□□□ 0.72
Lin28aQ8K3Y3 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Lin28aQ8K3Y3 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Lin28aQ8K3Y3 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Lin28aQ8K3Y3 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC19.54■□□□□ 0.72
Lin28aQ8K3Y3 Gm22238-201ENSMUST00000175222 88 ntBASIC19.54■□□□□ 0.72
Lin28aQ8K3Y3 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Lin28aQ8K3Y3 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Lin28aQ8K3Y3 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Lin28aQ8K3Y3 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC19.54■□□□□ 0.72
Lin28aQ8K3Y3 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Lin28aQ8K3Y3 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Lin28aQ8K3Y3 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Lin28aQ8K3Y3 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC19.53■□□□□ 0.72
Lin28aQ8K3Y3 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC19.53■□□□□ 0.72
Lin28aQ8K3Y3 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC19.53■□□□□ 0.72
Lin28aQ8K3Y3 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Lin28aQ8K3Y3 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Lin28aQ8K3Y3 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Lin28aQ8K3Y3 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC19.52■□□□□ 0.72
Lin28aQ8K3Y3 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Lin28aQ8K3Y3 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Lin28aQ8K3Y3 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Lin28aQ8K3Y3 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Lin28aQ8K3Y3 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Lin28aQ8K3Y3 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Lin28aQ8K3Y3 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC19.51■□□□□ 0.71
Lin28aQ8K3Y3 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Lin28aQ8K3Y3 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Lin28aQ8K3Y3 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC19.51■□□□□ 0.71
Lin28aQ8K3Y3 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Lin28aQ8K3Y3 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Lin28aQ8K3Y3 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Lin28aQ8K3Y3 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC19.51■□□□□ 0.71
Lin28aQ8K3Y3 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
Lin28aQ8K3Y3 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Lin28aQ8K3Y3 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Lin28aQ8K3Y3 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Lin28aQ8K3Y3 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Lin28aQ8K3Y3 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC19.5■□□□□ 0.71
Lin28aQ8K3Y3 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Lin28aQ8K3Y3 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Lin28aQ8K3Y3 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Lin28aQ8K3Y3 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Lin28aQ8K3Y3 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Lin28aQ8K3Y3 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Lin28aQ8K3Y3 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC19.5■□□□□ 0.71
Lin28aQ8K3Y3 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Lin28aQ8K3Y3 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Lin28aQ8K3Y3 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Lin28aQ8K3Y3 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC19.49■□□□□ 0.71
Lin28aQ8K3Y3 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC19.49■□□□□ 0.71
Lin28aQ8K3Y3 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Lin28aQ8K3Y3 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Lin28aQ8K3Y3 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Lin28aQ8K3Y3 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Lin28aQ8K3Y3 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC19.48■□□□□ 0.71
Lin28aQ8K3Y3 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Lin28aQ8K3Y3 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Lin28aQ8K3Y3 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Lin28aQ8K3Y3 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC19.47■□□□□ 0.71
Lin28aQ8K3Y3 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Lin28aQ8K3Y3 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Lin28aQ8K3Y3 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Lin28aQ8K3Y3 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Lin28aQ8K3Y3 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
Lin28aQ8K3Y3 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Lin28aQ8K3Y3 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Lin28aQ8K3Y3 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC19.46■□□□□ 0.71
Lin28aQ8K3Y3 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Lin28aQ8K3Y3 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Lin28aQ8K3Y3 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Lin28aQ8K3Y3 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Lin28aQ8K3Y3 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Lin28aQ8K3Y3 AC116713.1-201ENSMUST00000215074 430 ntBASIC19.45■□□□□ 0.7
Lin28aQ8K3Y3 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Lin28aQ8K3Y3 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Lin28aQ8K3Y3 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Lin28aQ8K3Y3 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Lin28aQ8K3Y3 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Lin28aQ8K3Y3 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Lin28aQ8K3Y3 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Lin28aQ8K3Y3 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Lin28aQ8K3Y3 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC19.44■□□□□ 0.7
Lin28aQ8K3Y3 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Lin28aQ8K3Y3 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Lin28aQ8K3Y3 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Lin28aQ8K3Y3 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Lin28aQ8K3Y3 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Lin28aQ8K3Y3 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
Lin28aQ8K3Y3 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Lin28aQ8K3Y3 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms