Protein–RNA interactions for Protein: Q8K3P5

Cnot6, CCR4-NOT transcription complex subunit 6, mousemouse

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnot6Q8K3P5 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Cnot6Q8K3P5 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Cnot6Q8K3P5 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cnot6Q8K3P5 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC20.41■□□□□ 0.86
Cnot6Q8K3P5 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cnot6Q8K3P5 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
Cnot6Q8K3P5 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Cnot6Q8K3P5 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Cnot6Q8K3P5 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC20.4■□□□□ 0.86
Cnot6Q8K3P5 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Cnot6Q8K3P5 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cnot6Q8K3P5 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Cnot6Q8K3P5 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Cnot6Q8K3P5 Iqck-206ENSMUST00000208658 2891 ntBASIC20.39■□□□□ 0.85
Cnot6Q8K3P5 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cnot6Q8K3P5 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC20.39■□□□□ 0.85
Cnot6Q8K3P5 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cnot6Q8K3P5 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Cnot6Q8K3P5 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Cnot6Q8K3P5 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Cnot6Q8K3P5 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cnot6Q8K3P5 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cnot6Q8K3P5 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Cnot6Q8K3P5 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cnot6Q8K3P5 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cnot6Q8K3P5 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cnot6Q8K3P5 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cnot6Q8K3P5 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
Cnot6Q8K3P5 Gm43403-201ENSMUST00000198011 1786 ntBASIC20.37■□□□□ 0.85
Cnot6Q8K3P5 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cnot6Q8K3P5 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cnot6Q8K3P5 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cnot6Q8K3P5 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cnot6Q8K3P5 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cnot6Q8K3P5 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Cnot6Q8K3P5 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cnot6Q8K3P5 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cnot6Q8K3P5 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cnot6Q8K3P5 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cnot6Q8K3P5 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Cnot6Q8K3P5 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Cnot6Q8K3P5 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cnot6Q8K3P5 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC20.36■□□□□ 0.85
Cnot6Q8K3P5 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cnot6Q8K3P5 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cnot6Q8K3P5 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cnot6Q8K3P5 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cnot6Q8K3P5 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cnot6Q8K3P5 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
Cnot6Q8K3P5 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Cnot6Q8K3P5 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Cnot6Q8K3P5 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Cnot6Q8K3P5 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cnot6Q8K3P5 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cnot6Q8K3P5 Gm10420-201ENSMUST00000121713 882 ntBASIC20.34■□□□□ 0.85
Cnot6Q8K3P5 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC20.34■□□□□ 0.85
Cnot6Q8K3P5 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Cnot6Q8K3P5 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Cnot6Q8K3P5 Gm34220-201ENSMUST00000223001 2709 ntBASIC20.34■□□□□ 0.85
Cnot6Q8K3P5 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cnot6Q8K3P5 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Cnot6Q8K3P5 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Cnot6Q8K3P5 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Cnot6Q8K3P5 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Cnot6Q8K3P5 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Cnot6Q8K3P5 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Cnot6Q8K3P5 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Cnot6Q8K3P5 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Cnot6Q8K3P5 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Cnot6Q8K3P5 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cnot6Q8K3P5 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Cnot6Q8K3P5 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Cnot6Q8K3P5 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cnot6Q8K3P5 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cnot6Q8K3P5 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cnot6Q8K3P5 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC20.32■□□□□ 0.84
Cnot6Q8K3P5 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cnot6Q8K3P5 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cnot6Q8K3P5 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cnot6Q8K3P5 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cnot6Q8K3P5 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cnot6Q8K3P5 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Cnot6Q8K3P5 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
Cnot6Q8K3P5 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cnot6Q8K3P5 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cnot6Q8K3P5 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cnot6Q8K3P5 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
Cnot6Q8K3P5 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cnot6Q8K3P5 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cnot6Q8K3P5 Gm4430-201ENSMUST00000192413 1943 ntBASIC20.31■□□□□ 0.84
Cnot6Q8K3P5 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Cnot6Q8K3P5 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cnot6Q8K3P5 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cnot6Q8K3P5 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cnot6Q8K3P5 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Cnot6Q8K3P5 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC20.3■□□□□ 0.84
Cnot6Q8K3P5 Snhg20-203ENSMUST00000182811 2153 ntBASIC20.29■□□□□ 0.84
Cnot6Q8K3P5 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Cnot6Q8K3P5 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Cnot6Q8K3P5 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms