Protein–RNA interactions for Protein: Q8K353

Cystm1, Cysteine-rich and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cystm1Q8K353 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cystm1Q8K353 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cystm1Q8K353 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cystm1Q8K353 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Cystm1Q8K353 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cystm1Q8K353 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Cystm1Q8K353 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cystm1Q8K353 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC13□□□□□ -0.33
Cystm1Q8K353 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cystm1Q8K353 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Cystm1Q8K353 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cystm1Q8K353 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Cystm1Q8K353 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Cystm1Q8K353 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cystm1Q8K353 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC13□□□□□ -0.33
Cystm1Q8K353 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Cystm1Q8K353 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Cystm1Q8K353 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Cystm1Q8K353 Cap2-205ENSMUST00000225824 1634 ntBASIC12.99□□□□□ -0.33
Cystm1Q8K353 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cystm1Q8K353 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cystm1Q8K353 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cystm1Q8K353 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC12.99□□□□□ -0.33
Cystm1Q8K353 Gm45364-201ENSMUST00000210883 159 ntBASIC12.99□□□□□ -0.33
Cystm1Q8K353 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cystm1Q8K353 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cystm1Q8K353 Gm9812-201ENSMUST00000061934 968 ntBASIC12.99□□□□□ -0.33
Cystm1Q8K353 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC12.99□□□□□ -0.33
Cystm1Q8K353 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cystm1Q8K353 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Cystm1Q8K353 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cystm1Q8K353 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Cystm1Q8K353 Snhg20-203ENSMUST00000182811 2153 ntBASIC12.98□□□□□ -0.33
Cystm1Q8K353 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cystm1Q8K353 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cystm1Q8K353 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC12.98□□□□□ -0.33
Cystm1Q8K353 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Cystm1Q8K353 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cystm1Q8K353 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cystm1Q8K353 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cystm1Q8K353 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cystm1Q8K353 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Cystm1Q8K353 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC12.98□□□□□ -0.33
Cystm1Q8K353 Scarna2-201ENSMUST00000157560 414 ntBASIC12.98□□□□□ -0.33
Cystm1Q8K353 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cystm1Q8K353 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Cystm1Q8K353 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cystm1Q8K353 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cystm1Q8K353 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cystm1Q8K353 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cystm1Q8K353 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Cystm1Q8K353 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Cystm1Q8K353 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cystm1Q8K353 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Cystm1Q8K353 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cystm1Q8K353 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Cystm1Q8K353 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC12.97□□□□□ -0.33
Cystm1Q8K353 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Cystm1Q8K353 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Cystm1Q8K353 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC12.97□□□□□ -0.33
Cystm1Q8K353 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cystm1Q8K353 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Cystm1Q8K353 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
Cystm1Q8K353 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cystm1Q8K353 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cystm1Q8K353 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Cystm1Q8K353 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Cystm1Q8K353 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Cystm1Q8K353 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cystm1Q8K353 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Cystm1Q8K353 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cystm1Q8K353 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cystm1Q8K353 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Cystm1Q8K353 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Cystm1Q8K353 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Cystm1Q8K353 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC12.96□□□□□ -0.34
Cystm1Q8K353 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Cystm1Q8K353 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Cystm1Q8K353 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cystm1Q8K353 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cystm1Q8K353 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cystm1Q8K353 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cystm1Q8K353 Kdm3b-204ENSMUST00000224715 2032 ntBASIC12.95□□□□□ -0.34
Cystm1Q8K353 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cystm1Q8K353 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Cystm1Q8K353 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Cystm1Q8K353 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cystm1Q8K353 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cystm1Q8K353 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cystm1Q8K353 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC12.94□□□□□ -0.34
Cystm1Q8K353 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cystm1Q8K353 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cystm1Q8K353 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC12.94□□□□□ -0.34
Cystm1Q8K353 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Cystm1Q8K353 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC12.94□□□□□ -0.34
Cystm1Q8K353 AC122317.2-201ENSMUST00000218708 1248 ntBASIC12.94□□□□□ -0.34
Cystm1Q8K353 AC153911.1-201ENSMUST00000220378 758 ntBASIC12.94□□□□□ -0.34
Cystm1Q8K353 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Cystm1Q8K353 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Cystm1Q8K353 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 14.2 ms