Protein–RNA interactions for Protein: Q8CHP0

Zc3h3, Zinc finger CCCH domain-containing protein 3, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3h3Q8CHP0 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Zc3h3Q8CHP0 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Zc3h3Q8CHP0 Gm12669-201ENSMUST00000122162 1009 ntBASIC20.85■□□□□ 0.93
Zc3h3Q8CHP0 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC20.85■□□□□ 0.93
Zc3h3Q8CHP0 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Zc3h3Q8CHP0 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Zc3h3Q8CHP0 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Zc3h3Q8CHP0 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Zc3h3Q8CHP0 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Zc3h3Q8CHP0 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Zc3h3Q8CHP0 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Zc3h3Q8CHP0 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Zc3h3Q8CHP0 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Zc3h3Q8CHP0 Gm7160-202ENSMUST00000188519 1027 ntBASIC20.84■□□□□ 0.93
Zc3h3Q8CHP0 Gm10657-201ENSMUST00000193528 1031 ntBASIC20.84■□□□□ 0.93
Zc3h3Q8CHP0 Gm43759-201ENSMUST00000196925 1261 ntBASIC20.84■□□□□ 0.93
Zc3h3Q8CHP0 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Zc3h3Q8CHP0 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Zc3h3Q8CHP0 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Zc3h3Q8CHP0 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Zc3h3Q8CHP0 Gm10129-202ENSMUST00000193100 1316 ntBASIC20.83■□□□□ 0.93
Zc3h3Q8CHP0 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Zc3h3Q8CHP0 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Zc3h3Q8CHP0 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC20.82■□□□□ 0.92
Zc3h3Q8CHP0 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC20.82■□□□□ 0.92
Zc3h3Q8CHP0 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC20.82■□□□□ 0.92
Zc3h3Q8CHP0 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Zc3h3Q8CHP0 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Zc3h3Q8CHP0 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC20.81■□□□□ 0.92
Zc3h3Q8CHP0 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
Zc3h3Q8CHP0 Gm18671-201ENSMUST00000214826 683 ntBASIC20.81■□□□□ 0.92
Zc3h3Q8CHP0 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Zc3h3Q8CHP0 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Zc3h3Q8CHP0 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Zc3h3Q8CHP0 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC20.81■□□□□ 0.92
Zc3h3Q8CHP0 Gm6085-201ENSMUST00000182774 1470 ntBASIC20.81■□□□□ 0.92
Zc3h3Q8CHP0 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC20.8■□□□□ 0.92
Zc3h3Q8CHP0 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Zc3h3Q8CHP0 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Zc3h3Q8CHP0 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Zc3h3Q8CHP0 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC20.8■□□□□ 0.92
Zc3h3Q8CHP0 Spcs1-204ENSMUST00000226782 949 ntBASIC20.8■□□□□ 0.92
Zc3h3Q8CHP0 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Zc3h3Q8CHP0 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Zc3h3Q8CHP0 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Zc3h3Q8CHP0 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Zc3h3Q8CHP0 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Zc3h3Q8CHP0 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Zc3h3Q8CHP0 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Zc3h3Q8CHP0 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC20.79■□□□□ 0.92
Zc3h3Q8CHP0 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Zc3h3Q8CHP0 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC20.79■□□□□ 0.92
Zc3h3Q8CHP0 Gm40848-201ENSMUST00000221998 324 ntBASIC20.79■□□□□ 0.92
Zc3h3Q8CHP0 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Zc3h3Q8CHP0 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Zc3h3Q8CHP0 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Zc3h3Q8CHP0 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Zc3h3Q8CHP0 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Zc3h3Q8CHP0 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC20.78■□□□□ 0.92
Zc3h3Q8CHP0 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Zc3h3Q8CHP0 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Zc3h3Q8CHP0 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Zc3h3Q8CHP0 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Zc3h3Q8CHP0 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Zc3h3Q8CHP0 Gm10602-201ENSMUST00000098239 609 ntBASIC20.77■□□□□ 0.92
Zc3h3Q8CHP0 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.91
Zc3h3Q8CHP0 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Zc3h3Q8CHP0 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
Zc3h3Q8CHP0 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Zc3h3Q8CHP0 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC20.76■□□□□ 0.91
Zc3h3Q8CHP0 AV356131-201ENSMUST00000206201 750 ntBASIC20.76■□□□□ 0.91
Zc3h3Q8CHP0 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Zc3h3Q8CHP0 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Zc3h3Q8CHP0 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Zc3h3Q8CHP0 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC20.75■□□□□ 0.91
Zc3h3Q8CHP0 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Zc3h3Q8CHP0 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Zc3h3Q8CHP0 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC20.75■□□□□ 0.91
Zc3h3Q8CHP0 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC20.74■□□□□ 0.91
Zc3h3Q8CHP0 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
Zc3h3Q8CHP0 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Zc3h3Q8CHP0 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC20.74■□□□□ 0.91
Zc3h3Q8CHP0 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Zc3h3Q8CHP0 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Zc3h3Q8CHP0 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Zc3h3Q8CHP0 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC20.73■□□□□ 0.91
Zc3h3Q8CHP0 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Zc3h3Q8CHP0 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Zc3h3Q8CHP0 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
Zc3h3Q8CHP0 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Zc3h3Q8CHP0 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Zc3h3Q8CHP0 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Zc3h3Q8CHP0 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Zc3h3Q8CHP0 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Zc3h3Q8CHP0 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC20.72■□□□□ 0.91
Zc3h3Q8CHP0 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC20.72■□□□□ 0.91
Zc3h3Q8CHP0 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC20.72■□□□□ 0.91
Zc3h3Q8CHP0 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Zc3h3Q8CHP0 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Zc3h3Q8CHP0 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms