Protein–RNA interactions for Protein: Q8C4H2

Samd3, Sterile alpha motif domain-containing protein 3, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samd3Q8C4H2 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Samd3Q8C4H2 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC21.72■■□□□ 1.07
Samd3Q8C4H2 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Samd3Q8C4H2 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC21.72■■□□□ 1.07
Samd3Q8C4H2 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Samd3Q8C4H2 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC21.72■■□□□ 1.07
Samd3Q8C4H2 Gm20634-201ENSMUST00000090779 2956 ntBASIC21.72■■□□□ 1.07
Samd3Q8C4H2 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC21.72■■□□□ 1.07
Samd3Q8C4H2 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Samd3Q8C4H2 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Samd3Q8C4H2 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
Samd3Q8C4H2 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
Samd3Q8C4H2 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Samd3Q8C4H2 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC21.71■■□□□ 1.07
Samd3Q8C4H2 Gm43034-201ENSMUST00000198678 1364 ntBASIC21.71■■□□□ 1.07
Samd3Q8C4H2 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Samd3Q8C4H2 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.07
Samd3Q8C4H2 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.07
Samd3Q8C4H2 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Samd3Q8C4H2 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC21.7■■□□□ 1.06
Samd3Q8C4H2 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
Samd3Q8C4H2 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Samd3Q8C4H2 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Samd3Q8C4H2 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC21.7■■□□□ 1.06
Samd3Q8C4H2 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Samd3Q8C4H2 Gm42418-201ENSMUST00000182010 1831 ntBASIC21.69■■□□□ 1.06
Samd3Q8C4H2 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
Samd3Q8C4H2 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Samd3Q8C4H2 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Samd3Q8C4H2 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Samd3Q8C4H2 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Samd3Q8C4H2 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Samd3Q8C4H2 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC21.68■■□□□ 1.06
Samd3Q8C4H2 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC21.68■■□□□ 1.06
Samd3Q8C4H2 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC21.68■■□□□ 1.06
Samd3Q8C4H2 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Samd3Q8C4H2 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Samd3Q8C4H2 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Samd3Q8C4H2 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Samd3Q8C4H2 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Samd3Q8C4H2 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
Samd3Q8C4H2 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Samd3Q8C4H2 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Samd3Q8C4H2 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
Samd3Q8C4H2 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
Samd3Q8C4H2 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
Samd3Q8C4H2 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Samd3Q8C4H2 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Samd3Q8C4H2 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC21.66■■□□□ 1.06
Samd3Q8C4H2 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
Samd3Q8C4H2 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Samd3Q8C4H2 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC21.66■■□□□ 1.06
Samd3Q8C4H2 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC21.66■■□□□ 1.06
Samd3Q8C4H2 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Samd3Q8C4H2 Gm9870-201ENSMUST00000063874 645 ntBASIC21.66■■□□□ 1.06
Samd3Q8C4H2 Kdm3b-204ENSMUST00000224715 2032 ntBASIC21.66■■□□□ 1.06
Samd3Q8C4H2 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Samd3Q8C4H2 Gm4430-201ENSMUST00000192413 1943 ntBASIC21.65■■□□□ 1.06
Samd3Q8C4H2 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Samd3Q8C4H2 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Samd3Q8C4H2 Golgb1-201ENSMUST00000023534 498 ntBASIC21.65■■□□□ 1.06
Samd3Q8C4H2 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Samd3Q8C4H2 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.06
Samd3Q8C4H2 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Samd3Q8C4H2 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC21.64■■□□□ 1.06
Samd3Q8C4H2 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
Samd3Q8C4H2 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Samd3Q8C4H2 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC21.64■■□□□ 1.05
Samd3Q8C4H2 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Samd3Q8C4H2 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC21.64■■□□□ 1.05
Samd3Q8C4H2 Gm21956-201ENSMUST00000179946 522 ntBASIC21.64■■□□□ 1.05
Samd3Q8C4H2 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Samd3Q8C4H2 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Samd3Q8C4H2 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
Samd3Q8C4H2 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Samd3Q8C4H2 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Samd3Q8C4H2 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Samd3Q8C4H2 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Samd3Q8C4H2 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
Samd3Q8C4H2 AC164883.3-201ENSMUST00000227396 1774 ntBASIC21.63■■□□□ 1.05
Samd3Q8C4H2 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
Samd3Q8C4H2 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Samd3Q8C4H2 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC21.62■■□□□ 1.05
Samd3Q8C4H2 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC21.62■■□□□ 1.05
Samd3Q8C4H2 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Samd3Q8C4H2 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
Samd3Q8C4H2 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Samd3Q8C4H2 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Samd3Q8C4H2 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Samd3Q8C4H2 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Samd3Q8C4H2 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC21.61■■□□□ 1.05
Samd3Q8C4H2 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Samd3Q8C4H2 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
Samd3Q8C4H2 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Samd3Q8C4H2 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Samd3Q8C4H2 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC21.61■■□□□ 1.05
Samd3Q8C4H2 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC21.61■■□□□ 1.05
Samd3Q8C4H2 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC21.6■■□□□ 1.05
Samd3Q8C4H2 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC21.6■■□□□ 1.05
Samd3Q8C4H2 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 12.5 ms