Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Tsen54Q8C2A2 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tsen54Q8C2A2 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Tsen54Q8C2A2 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tsen54Q8C2A2 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Tsen54Q8C2A2 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tsen54Q8C2A2 Gm16437-201ENSMUST00000025669 507 ntBASIC17.35■□□□□ 0.37
Tsen54Q8C2A2 Terc-201ENSMUST00000082862 423 ntBASIC17.35■□□□□ 0.37
Tsen54Q8C2A2 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tsen54Q8C2A2 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tsen54Q8C2A2 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Tsen54Q8C2A2 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tsen54Q8C2A2 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tsen54Q8C2A2 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tsen54Q8C2A2 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Tsen54Q8C2A2 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tsen54Q8C2A2 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tsen54Q8C2A2 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Tsen54Q8C2A2 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.37
Tsen54Q8C2A2 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Tsen54Q8C2A2 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Tsen54Q8C2A2 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
Tsen54Q8C2A2 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC17.33■□□□□ 0.36
Tsen54Q8C2A2 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Tsen54Q8C2A2 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tsen54Q8C2A2 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Tsen54Q8C2A2 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Tsen54Q8C2A2 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tsen54Q8C2A2 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Tsen54Q8C2A2 Gm8093-201ENSMUST00000128935 1892 ntBASIC17.33■□□□□ 0.36
Tsen54Q8C2A2 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC17.32■□□□□ 0.36
Tsen54Q8C2A2 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC17.32■□□□□ 0.36
Tsen54Q8C2A2 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tsen54Q8C2A2 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tsen54Q8C2A2 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tsen54Q8C2A2 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tsen54Q8C2A2 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tsen54Q8C2A2 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Tsen54Q8C2A2 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tsen54Q8C2A2 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Tsen54Q8C2A2 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Tsen54Q8C2A2 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Tsen54Q8C2A2 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tsen54Q8C2A2 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Tsen54Q8C2A2 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Tsen54Q8C2A2 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tsen54Q8C2A2 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tsen54Q8C2A2 Golph3-202ENSMUST00000226517 2359 ntBASIC17.3■□□□□ 0.36
Tsen54Q8C2A2 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tsen54Q8C2A2 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC17.3■□□□□ 0.36
Tsen54Q8C2A2 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Tsen54Q8C2A2 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tsen54Q8C2A2 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Tsen54Q8C2A2 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tsen54Q8C2A2 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tsen54Q8C2A2 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC17.3■□□□□ 0.36
Tsen54Q8C2A2 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Tsen54Q8C2A2 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Tsen54Q8C2A2 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Tsen54Q8C2A2 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tsen54Q8C2A2 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Tsen54Q8C2A2 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Tsen54Q8C2A2 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Tsen54Q8C2A2 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tsen54Q8C2A2 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Tsen54Q8C2A2 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tsen54Q8C2A2 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC17.28■□□□□ 0.36
Tsen54Q8C2A2 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tsen54Q8C2A2 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tsen54Q8C2A2 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tsen54Q8C2A2 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tsen54Q8C2A2 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Tsen54Q8C2A2 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Tsen54Q8C2A2 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Tsen54Q8C2A2 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
Tsen54Q8C2A2 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC17.27■□□□□ 0.36
Tsen54Q8C2A2 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Tsen54Q8C2A2 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Tsen54Q8C2A2 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Tsen54Q8C2A2 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Tsen54Q8C2A2 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
Tsen54Q8C2A2 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Tsen54Q8C2A2 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Tsen54Q8C2A2 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Tsen54Q8C2A2 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Tsen54Q8C2A2 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Tsen54Q8C2A2 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Tsen54Q8C2A2 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Tsen54Q8C2A2 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Tsen54Q8C2A2 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Tsen54Q8C2A2 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Tsen54Q8C2A2 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Tsen54Q8C2A2 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC17.26■□□□□ 0.35
Tsen54Q8C2A2 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC17.26■□□□□ 0.35
Tsen54Q8C2A2 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tsen54Q8C2A2 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC17.25■□□□□ 0.35
Tsen54Q8C2A2 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tsen54Q8C2A2 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tsen54Q8C2A2 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Tsen54Q8C2A2 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 55.5 ms