Protein–RNA interactions for Protein: Q8C196

Cps1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, mousemouse

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cps1Q8C196 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
Cps1Q8C196 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
Cps1Q8C196 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC28.98■■■□□ 2.23
Cps1Q8C196 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
Cps1Q8C196 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC28.97■■■□□ 2.23
Cps1Q8C196 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC28.97■■■□□ 2.23
Cps1Q8C196 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC28.96■■■□□ 2.23
Cps1Q8C196 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
Cps1Q8C196 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC28.96■■■□□ 2.23
Cps1Q8C196 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.23
Cps1Q8C196 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC28.95■■■□□ 2.23
Cps1Q8C196 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC28.95■■■□□ 2.23
Cps1Q8C196 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC28.95■■■□□ 2.23
Cps1Q8C196 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.23
Cps1Q8C196 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.22
Cps1Q8C196 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC28.94■■■□□ 2.22
Cps1Q8C196 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
Cps1Q8C196 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
Cps1Q8C196 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC28.94■■■□□ 2.22
Cps1Q8C196 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
Cps1Q8C196 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC28.93■■■□□ 2.22
Cps1Q8C196 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
Cps1Q8C196 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC28.93■■■□□ 2.22
Cps1Q8C196 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC28.93■■■□□ 2.22
Cps1Q8C196 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
Cps1Q8C196 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC28.93■■■□□ 2.22
Cps1Q8C196 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC28.93■■■□□ 2.22
Cps1Q8C196 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC28.93■■■□□ 2.22
Cps1Q8C196 AC164629.5-201ENSMUST00000220387 632 ntBASIC28.93■■■□□ 2.22
Cps1Q8C196 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC28.92■■■□□ 2.22
Cps1Q8C196 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC28.92■■■□□ 2.22
Cps1Q8C196 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
Cps1Q8C196 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC28.92■■■□□ 2.22
Cps1Q8C196 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC28.91■■■□□ 2.22
Cps1Q8C196 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC28.91■■■□□ 2.22
Cps1Q8C196 Gm4430-201ENSMUST00000192413 1943 ntBASIC28.91■■■□□ 2.22
Cps1Q8C196 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC28.91■■■□□ 2.22
Cps1Q8C196 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
Cps1Q8C196 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
Cps1Q8C196 Gm8493-201ENSMUST00000196881 489 ntBASIC28.9■■■□□ 2.22
Cps1Q8C196 Wdr70-203ENSMUST00000227371 1130 ntBASIC28.9■■■□□ 2.22
Cps1Q8C196 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
Cps1Q8C196 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC28.9■■■□□ 2.22
Cps1Q8C196 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC28.9■■■□□ 2.22
Cps1Q8C196 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC28.9■■■□□ 2.22
Cps1Q8C196 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
Cps1Q8C196 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
Cps1Q8C196 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.21
Cps1Q8C196 Gm7143-201ENSMUST00000222811 859 ntBASIC28.89■■■□□ 2.21
Cps1Q8C196 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC28.88■■■□□ 2.21
Cps1Q8C196 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC28.88■■■□□ 2.21
Cps1Q8C196 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC28.88■■■□□ 2.21
Cps1Q8C196 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC28.88■■■□□ 2.21
Cps1Q8C196 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC28.87■■■□□ 2.21
Cps1Q8C196 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC28.87■■■□□ 2.21
Cps1Q8C196 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC28.87■■■□□ 2.21
Cps1Q8C196 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC28.87■■■□□ 2.21
Cps1Q8C196 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC28.87■■■□□ 2.21
Cps1Q8C196 Gm43759-201ENSMUST00000196925 1261 ntBASIC28.87■■■□□ 2.21
Cps1Q8C196 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
Cps1Q8C196 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
Cps1Q8C196 Gm5576-201ENSMUST00000075809 1236 ntBASIC28.86■■■□□ 2.21
Cps1Q8C196 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
Cps1Q8C196 Gm29257-201ENSMUST00000186115 639 ntBASIC28.85■■■□□ 2.21
Cps1Q8C196 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
Cps1Q8C196 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
Cps1Q8C196 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC28.85■■■□□ 2.21
Cps1Q8C196 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC28.84■■■□□ 2.21
Cps1Q8C196 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
Cps1Q8C196 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
Cps1Q8C196 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC28.83■■■□□ 2.21
Cps1Q8C196 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
Cps1Q8C196 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC28.83■■■□□ 2.21
Cps1Q8C196 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
Cps1Q8C196 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC28.83■■■□□ 2.21
Cps1Q8C196 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
Cps1Q8C196 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC28.82■■■□□ 2.2
Cps1Q8C196 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
Cps1Q8C196 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC28.82■■■□□ 2.2
Cps1Q8C196 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
Cps1Q8C196 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
Cps1Q8C196 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC28.81■■■□□ 2.2
Cps1Q8C196 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
Cps1Q8C196 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC28.81■■■□□ 2.2
Cps1Q8C196 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC28.8■■■□□ 2.2
Cps1Q8C196 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC28.8■■■□□ 2.2
Cps1Q8C196 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC28.8■■■□□ 2.2
Cps1Q8C196 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC28.8■■■□□ 2.2
Cps1Q8C196 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
Cps1Q8C196 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC28.79■■■□□ 2.2
Cps1Q8C196 AC153890.1-201ENSMUST00000220021 2469 ntBASIC28.79■■■□□ 2.2
Cps1Q8C196 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC28.79■■■□□ 2.2
Cps1Q8C196 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
Cps1Q8C196 Gm5874-201ENSMUST00000096101 508 ntBASIC28.79■■■□□ 2.2
Cps1Q8C196 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
Cps1Q8C196 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
Cps1Q8C196 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
Cps1Q8C196 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC28.78■■■□□ 2.2
Cps1Q8C196 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC28.77■■■□□ 2.2
Cps1Q8C196 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC28.77■■■□□ 2.2
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms