Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC29.94■■■□□ 2.38
Usp47Q8BY87 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC29.93■■■□□ 2.38
Usp47Q8BY87 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC29.93■■■□□ 2.38
Usp47Q8BY87 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC29.93■■■□□ 2.38
Usp47Q8BY87 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
Usp47Q8BY87 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC29.92■■■□□ 2.38
Usp47Q8BY87 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC29.92■■■□□ 2.38
Usp47Q8BY87 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
Usp47Q8BY87 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
Usp47Q8BY87 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC29.9■■■□□ 2.38
Usp47Q8BY87 Gm26766-202ENSMUST00000227544 2347 ntBASIC29.9■■■□□ 2.38
Usp47Q8BY87 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC29.9■■■□□ 2.38
Usp47Q8BY87 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC29.9■■■□□ 2.38
Usp47Q8BY87 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
Usp47Q8BY87 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
Usp47Q8BY87 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
Usp47Q8BY87 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
Usp47Q8BY87 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
Usp47Q8BY87 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
Usp47Q8BY87 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
Usp47Q8BY87 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC29.88■■■□□ 2.37
Usp47Q8BY87 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC29.87■■■□□ 2.37
Usp47Q8BY87 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
Usp47Q8BY87 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
Usp47Q8BY87 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC29.87■■■□□ 2.37
Usp47Q8BY87 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
Usp47Q8BY87 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
Usp47Q8BY87 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
Usp47Q8BY87 Gm4430-201ENSMUST00000192413 1943 ntBASIC29.87■■■□□ 2.37
Usp47Q8BY87 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC29.86■■■□□ 2.37
Usp47Q8BY87 AC164883.3-201ENSMUST00000227396 1774 ntBASIC29.86■■■□□ 2.37
Usp47Q8BY87 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC29.86■■■□□ 2.37
Usp47Q8BY87 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC29.85■■■□□ 2.37
Usp47Q8BY87 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
Usp47Q8BY87 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC29.85■■■□□ 2.37
Usp47Q8BY87 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
Usp47Q8BY87 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
Usp47Q8BY87 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC29.84■■■□□ 2.37
Usp47Q8BY87 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC29.83■■■□□ 2.37
Usp47Q8BY87 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC29.83■■■□□ 2.37
Usp47Q8BY87 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC29.83■■■□□ 2.37
Usp47Q8BY87 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
Usp47Q8BY87 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC29.82■■■□□ 2.36
Usp47Q8BY87 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
Usp47Q8BY87 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC29.82■■■□□ 2.36
Usp47Q8BY87 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
Usp47Q8BY87 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
Usp47Q8BY87 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC29.82■■■□□ 2.36
Usp47Q8BY87 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC29.82■■■□□ 2.36
Usp47Q8BY87 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC29.81■■■□□ 2.36
Usp47Q8BY87 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC29.81■■■□□ 2.36
Usp47Q8BY87 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC29.81■■■□□ 2.36
Usp47Q8BY87 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
Usp47Q8BY87 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
Usp47Q8BY87 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC29.81■■■□□ 2.36
Usp47Q8BY87 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
Usp47Q8BY87 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC29.8■■■□□ 2.36
Usp47Q8BY87 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
Usp47Q8BY87 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
Usp47Q8BY87 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
Usp47Q8BY87 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
Usp47Q8BY87 Gm21956-201ENSMUST00000179946 522 ntBASIC29.79■■■□□ 2.36
Usp47Q8BY87 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC29.79■■■□□ 2.36
Usp47Q8BY87 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC29.79■■■□□ 2.36
Usp47Q8BY87 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
Usp47Q8BY87 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
Usp47Q8BY87 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
Usp47Q8BY87 Gm12922-201ENSMUST00000120626 809 ntBASIC29.78■■■□□ 2.36
Usp47Q8BY87 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
Usp47Q8BY87 Gm43403-201ENSMUST00000198011 1786 ntBASIC29.78■■■□□ 2.36
Usp47Q8BY87 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC29.78■■■□□ 2.36
Usp47Q8BY87 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC29.78■■■□□ 2.36
Usp47Q8BY87 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC29.78■■■□□ 2.36
Usp47Q8BY87 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC29.77■■■□□ 2.36
Usp47Q8BY87 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
Usp47Q8BY87 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC29.77■■■□□ 2.36
Usp47Q8BY87 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC29.77■■■□□ 2.36
Usp47Q8BY87 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
Usp47Q8BY87 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC29.77■■■□□ 2.36
Usp47Q8BY87 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC29.77■■■□□ 2.36
Usp47Q8BY87 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
Usp47Q8BY87 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC29.77■■■□□ 2.36
Usp47Q8BY87 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC29.77■■■□□ 2.36
Usp47Q8BY87 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
Usp47Q8BY87 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC29.76■■■□□ 2.35
Usp47Q8BY87 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
Usp47Q8BY87 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
Usp47Q8BY87 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC29.75■■■□□ 2.35
Usp47Q8BY87 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC29.75■■■□□ 2.35
Usp47Q8BY87 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
Usp47Q8BY87 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC29.75■■■□□ 2.35
Usp47Q8BY87 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC29.73■■■□□ 2.35
Usp47Q8BY87 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
Usp47Q8BY87 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
Usp47Q8BY87 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
Usp47Q8BY87 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC29.73■■■□□ 2.35
Usp47Q8BY87 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC29.73■■■□□ 2.35
Usp47Q8BY87 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
Usp47Q8BY87 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
Usp47Q8BY87 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC29.72■■■□□ 2.35
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms