Protein–RNA interactions for Protein: Q8BWR4

Usp40, Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40Q8BWR4 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC29.07■■■□□ 2.24
Usp40Q8BWR4 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC29.07■■■□□ 2.24
Usp40Q8BWR4 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC29.07■■■□□ 2.24
Usp40Q8BWR4 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC29.07■■■□□ 2.24
Usp40Q8BWR4 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
Usp40Q8BWR4 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
Usp40Q8BWR4 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
Usp40Q8BWR4 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
Usp40Q8BWR4 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
Usp40Q8BWR4 Gm4430-201ENSMUST00000192413 1943 ntBASIC29.05■■■□□ 2.24
Usp40Q8BWR4 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC29.05■■■□□ 2.24
Usp40Q8BWR4 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC29.04■■■□□ 2.24
Usp40Q8BWR4 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
Usp40Q8BWR4 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
Usp40Q8BWR4 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
Usp40Q8BWR4 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
Usp40Q8BWR4 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
Usp40Q8BWR4 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC29.03■■■□□ 2.24
Usp40Q8BWR4 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC29.02■■■□□ 2.24
Usp40Q8BWR4 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC29.02■■■□□ 2.24
Usp40Q8BWR4 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC29.02■■■□□ 2.24
Usp40Q8BWR4 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC29.02■■■□□ 2.24
Usp40Q8BWR4 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC29.01■■■□□ 2.24
Usp40Q8BWR4 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.24
Usp40Q8BWR4 Gm9207-201ENSMUST00000198773 1115 ntBASIC29.01■■■□□ 2.23
Usp40Q8BWR4 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC29.01■■■□□ 2.23
Usp40Q8BWR4 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.23
Usp40Q8BWR4 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC29.01■■■□□ 2.23
Usp40Q8BWR4 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.23
Usp40Q8BWR4 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
Usp40Q8BWR4 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC29■■■□□ 2.23
Usp40Q8BWR4 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
Usp40Q8BWR4 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC29■■■□□ 2.23
Usp40Q8BWR4 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC29■■■□□ 2.23
Usp40Q8BWR4 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
Usp40Q8BWR4 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
Usp40Q8BWR4 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC29■■■□□ 2.23
Usp40Q8BWR4 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
Usp40Q8BWR4 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC28.99■■■□□ 2.23
Usp40Q8BWR4 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC28.99■■■□□ 2.23
Usp40Q8BWR4 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC28.99■■■□□ 2.23
Usp40Q8BWR4 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC28.99■■■□□ 2.23
Usp40Q8BWR4 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC28.99■■■□□ 2.23
Usp40Q8BWR4 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC28.99■■■□□ 2.23
Usp40Q8BWR4 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
Usp40Q8BWR4 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC28.98■■■□□ 2.23
Usp40Q8BWR4 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
Usp40Q8BWR4 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC28.97■■■□□ 2.23
Usp40Q8BWR4 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC28.96■■■□□ 2.23
Usp40Q8BWR4 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC28.96■■■□□ 2.23
Usp40Q8BWR4 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC28.96■■■□□ 2.23
Usp40Q8BWR4 AC153962.1-201ENSMUST00000218530 1948 ntBASIC28.96■■■□□ 2.23
Usp40Q8BWR4 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC28.96■■■□□ 2.23
Usp40Q8BWR4 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
Usp40Q8BWR4 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
Usp40Q8BWR4 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC28.96■■■□□ 2.23
Usp40Q8BWR4 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
Usp40Q8BWR4 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
Usp40Q8BWR4 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
Usp40Q8BWR4 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC28.95■■■□□ 2.22
Usp40Q8BWR4 Serp2-204ENSMUST00000228055 705 ntBASIC28.95■■■□□ 2.22
Usp40Q8BWR4 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
Usp40Q8BWR4 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
Usp40Q8BWR4 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC28.94■■■□□ 2.22
Usp40Q8BWR4 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC28.94■■■□□ 2.22
Usp40Q8BWR4 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC28.94■■■□□ 2.22
Usp40Q8BWR4 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
Usp40Q8BWR4 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC28.94■■■□□ 2.22
Usp40Q8BWR4 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
Usp40Q8BWR4 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
Usp40Q8BWR4 Krt8-ps-201ENSMUST00000208495 945 ntBASIC28.93■■■□□ 2.22
Usp40Q8BWR4 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC28.93■■■□□ 2.22
Usp40Q8BWR4 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC28.93■■■□□ 2.22
Usp40Q8BWR4 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC28.93■■■□□ 2.22
Usp40Q8BWR4 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC28.93■■■□□ 2.22
Usp40Q8BWR4 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC28.93■■■□□ 2.22
Usp40Q8BWR4 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC28.93■■■□□ 2.22
Usp40Q8BWR4 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC28.92■■■□□ 2.22
Usp40Q8BWR4 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC28.92■■■□□ 2.22
Usp40Q8BWR4 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC28.92■■■□□ 2.22
Usp40Q8BWR4 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC28.92■■■□□ 2.22
Usp40Q8BWR4 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC28.91■■■□□ 2.22
Usp40Q8BWR4 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC28.91■■■□□ 2.22
Usp40Q8BWR4 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
Usp40Q8BWR4 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC28.91■■■□□ 2.22
Usp40Q8BWR4 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC28.91■■■□□ 2.22
Usp40Q8BWR4 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
Usp40Q8BWR4 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
Usp40Q8BWR4 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC28.89■■■□□ 2.22
Usp40Q8BWR4 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
Usp40Q8BWR4 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC28.89■■■□□ 2.22
Usp40Q8BWR4 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
Usp40Q8BWR4 Gm10657-201ENSMUST00000193528 1031 ntBASIC28.89■■■□□ 2.22
Usp40Q8BWR4 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC28.89■■■□□ 2.22
Usp40Q8BWR4 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC28.88■■■□□ 2.21
Usp40Q8BWR4 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC28.88■■■□□ 2.21
Usp40Q8BWR4 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC28.88■■■□□ 2.21
Usp40Q8BWR4 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC28.88■■■□□ 2.21
Usp40Q8BWR4 Gm7143-201ENSMUST00000222811 859 ntBASIC28.88■■■□□ 2.21
Usp40Q8BWR4 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC28.88■■■□□ 2.21
Retrieved 100 of 76,532 protein–RNA pairs in 148.8 ms