Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cdk5rap1Q8BTW8 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cdk5rap1Q8BTW8 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cdk5rap1Q8BTW8 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Cdk5rap1Q8BTW8 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC19.87■□□□□ 0.77
Cdk5rap1Q8BTW8 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC19.87■□□□□ 0.77
Cdk5rap1Q8BTW8 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Cdk5rap1Q8BTW8 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cdk5rap1Q8BTW8 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Cdk5rap1Q8BTW8 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC19.86■□□□□ 0.77
Cdk5rap1Q8BTW8 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Cdk5rap1Q8BTW8 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cdk5rap1Q8BTW8 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cdk5rap1Q8BTW8 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cdk5rap1Q8BTW8 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cdk5rap1Q8BTW8 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Cdk5rap1Q8BTW8 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Cdk5rap1Q8BTW8 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Cdk5rap1Q8BTW8 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cdk5rap1Q8BTW8 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cdk5rap1Q8BTW8 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC19.85■□□□□ 0.77
Cdk5rap1Q8BTW8 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC19.85■□□□□ 0.77
Cdk5rap1Q8BTW8 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cdk5rap1Q8BTW8 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cdk5rap1Q8BTW8 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC19.85■□□□□ 0.77
Cdk5rap1Q8BTW8 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cdk5rap1Q8BTW8 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cdk5rap1Q8BTW8 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Cdk5rap1Q8BTW8 Gm43034-201ENSMUST00000198678 1364 ntBASIC19.84■□□□□ 0.77
Cdk5rap1Q8BTW8 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC19.84■□□□□ 0.77
Cdk5rap1Q8BTW8 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cdk5rap1Q8BTW8 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cdk5rap1Q8BTW8 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cdk5rap1Q8BTW8 Gm15039-201ENSMUST00000118914 875 ntBASIC19.84■□□□□ 0.77
Cdk5rap1Q8BTW8 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC19.84■□□□□ 0.77
Cdk5rap1Q8BTW8 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC19.84■□□□□ 0.77
Cdk5rap1Q8BTW8 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cdk5rap1Q8BTW8 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cdk5rap1Q8BTW8 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC19.84■□□□□ 0.77
Cdk5rap1Q8BTW8 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Cdk5rap1Q8BTW8 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cdk5rap1Q8BTW8 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
Cdk5rap1Q8BTW8 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
Cdk5rap1Q8BTW8 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Cdk5rap1Q8BTW8 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC19.83■□□□□ 0.77
Cdk5rap1Q8BTW8 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC19.83■□□□□ 0.77
Cdk5rap1Q8BTW8 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC19.83■□□□□ 0.77
Cdk5rap1Q8BTW8 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Cdk5rap1Q8BTW8 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Cdk5rap1Q8BTW8 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Cdk5rap1Q8BTW8 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
Cdk5rap1Q8BTW8 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Cdk5rap1Q8BTW8 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cdk5rap1Q8BTW8 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cdk5rap1Q8BTW8 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cdk5rap1Q8BTW8 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC19.82■□□□□ 0.76
Cdk5rap1Q8BTW8 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC19.82■□□□□ 0.76
Cdk5rap1Q8BTW8 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cdk5rap1Q8BTW8 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cdk5rap1Q8BTW8 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cdk5rap1Q8BTW8 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cdk5rap1Q8BTW8 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Cdk5rap1Q8BTW8 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cdk5rap1Q8BTW8 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC19.81■□□□□ 0.76
Cdk5rap1Q8BTW8 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Cdk5rap1Q8BTW8 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC19.81■□□□□ 0.76
Cdk5rap1Q8BTW8 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cdk5rap1Q8BTW8 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC19.81■□□□□ 0.76
Cdk5rap1Q8BTW8 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
Cdk5rap1Q8BTW8 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cdk5rap1Q8BTW8 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
Cdk5rap1Q8BTW8 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cdk5rap1Q8BTW8 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC19.8■□□□□ 0.76
Cdk5rap1Q8BTW8 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC19.8■□□□□ 0.76
Cdk5rap1Q8BTW8 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cdk5rap1Q8BTW8 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Cdk5rap1Q8BTW8 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC19.8■□□□□ 0.76
Cdk5rap1Q8BTW8 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cdk5rap1Q8BTW8 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cdk5rap1Q8BTW8 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cdk5rap1Q8BTW8 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC19.79■□□□□ 0.76
Cdk5rap1Q8BTW8 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cdk5rap1Q8BTW8 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
Cdk5rap1Q8BTW8 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cdk5rap1Q8BTW8 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cdk5rap1Q8BTW8 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cdk5rap1Q8BTW8 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cdk5rap1Q8BTW8 Golgb1-201ENSMUST00000023534 498 ntBASIC19.78■□□□□ 0.76
Cdk5rap1Q8BTW8 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cdk5rap1Q8BTW8 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC19.78■□□□□ 0.76
Cdk5rap1Q8BTW8 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cdk5rap1Q8BTW8 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cdk5rap1Q8BTW8 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cdk5rap1Q8BTW8 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cdk5rap1Q8BTW8 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cdk5rap1Q8BTW8 Gm21956-201ENSMUST00000179946 522 ntBASIC19.77■□□□□ 0.76
Cdk5rap1Q8BTW8 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cdk5rap1Q8BTW8 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Cdk5rap1Q8BTW8 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cdk5rap1Q8BTW8 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC19.77■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms