Protein–RNA interactions for Protein: Q8BMK4

Ckap4, Cytoskeleton-associated protein 4, mousemouse

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4Q8BMK4 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Ckap4Q8BMK4 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Ckap4Q8BMK4 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ckap4Q8BMK4 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Ckap4Q8BMK4 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ckap4Q8BMK4 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ckap4Q8BMK4 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ckap4Q8BMK4 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ckap4Q8BMK4 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ckap4Q8BMK4 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Ckap4Q8BMK4 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ckap4Q8BMK4 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ckap4Q8BMK4 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC19.66■□□□□ 0.74
Ckap4Q8BMK4 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Ckap4Q8BMK4 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ckap4Q8BMK4 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Ckap4Q8BMK4 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ckap4Q8BMK4 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ckap4Q8BMK4 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ckap4Q8BMK4 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ckap4Q8BMK4 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ckap4Q8BMK4 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
Ckap4Q8BMK4 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC19.65■□□□□ 0.74
Ckap4Q8BMK4 Cap2-205ENSMUST00000225824 1634 ntBASIC19.65■□□□□ 0.74
Ckap4Q8BMK4 Gm42418-201ENSMUST00000182010 1831 ntBASIC19.65■□□□□ 0.74
Ckap4Q8BMK4 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Ckap4Q8BMK4 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ckap4Q8BMK4 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ckap4Q8BMK4 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ckap4Q8BMK4 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ckap4Q8BMK4 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ckap4Q8BMK4 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ckap4Q8BMK4 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Ckap4Q8BMK4 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ckap4Q8BMK4 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC19.63■□□□□ 0.73
Ckap4Q8BMK4 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ckap4Q8BMK4 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Ckap4Q8BMK4 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC19.63■□□□□ 0.73
Ckap4Q8BMK4 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ckap4Q8BMK4 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ckap4Q8BMK4 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Ckap4Q8BMK4 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Ckap4Q8BMK4 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ckap4Q8BMK4 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ckap4Q8BMK4 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ckap4Q8BMK4 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Ckap4Q8BMK4 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Ckap4Q8BMK4 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Ckap4Q8BMK4 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ckap4Q8BMK4 Gm15043-201ENSMUST00000118843 1543 ntBASIC19.62■□□□□ 0.73
Ckap4Q8BMK4 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ckap4Q8BMK4 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Ckap4Q8BMK4 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC19.62■□□□□ 0.73
Ckap4Q8BMK4 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Ckap4Q8BMK4 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC19.62■□□□□ 0.73
Ckap4Q8BMK4 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Ckap4Q8BMK4 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC19.62■□□□□ 0.73
Ckap4Q8BMK4 Gm5067-201ENSMUST00000170449 1009 ntBASIC19.61■□□□□ 0.73
Ckap4Q8BMK4 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC19.61■□□□□ 0.73
Ckap4Q8BMK4 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Ckap4Q8BMK4 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ckap4Q8BMK4 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ckap4Q8BMK4 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Ckap4Q8BMK4 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ckap4Q8BMK4 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ckap4Q8BMK4 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ckap4Q8BMK4 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ckap4Q8BMK4 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ckap4Q8BMK4 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ckap4Q8BMK4 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Ckap4Q8BMK4 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ckap4Q8BMK4 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Ckap4Q8BMK4 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Ckap4Q8BMK4 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ckap4Q8BMK4 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ckap4Q8BMK4 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ckap4Q8BMK4 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC19.59■□□□□ 0.73
Ckap4Q8BMK4 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ckap4Q8BMK4 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ckap4Q8BMK4 Gm43592-201ENSMUST00000196922 1165 ntBASIC19.59■□□□□ 0.73
Ckap4Q8BMK4 Gm10616-201ENSMUST00000205285 2127 ntBASIC19.59■□□□□ 0.73
Ckap4Q8BMK4 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Ckap4Q8BMK4 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ckap4Q8BMK4 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC19.58■□□□□ 0.72
Ckap4Q8BMK4 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Ckap4Q8BMK4 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC19.58■□□□□ 0.72
Ckap4Q8BMK4 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Ckap4Q8BMK4 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Ckap4Q8BMK4 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Ckap4Q8BMK4 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ckap4Q8BMK4 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Ckap4Q8BMK4 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Ckap4Q8BMK4 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ckap4Q8BMK4 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Ckap4Q8BMK4 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ckap4Q8BMK4 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ckap4Q8BMK4 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
Ckap4Q8BMK4 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ckap4Q8BMK4 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ckap4Q8BMK4 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.56■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms