Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC28.2■■■□□ 2.1
Col16a1Q8BLX7 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC28.19■■■□□ 2.1
Col16a1Q8BLX7 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
Col16a1Q8BLX7 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
Col16a1Q8BLX7 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
Col16a1Q8BLX7 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
Col16a1Q8BLX7 Mir7075-201ENSMUST00000184187 82 ntBASIC28.19■■■□□ 2.1
Col16a1Q8BLX7 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Col16a1Q8BLX7 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Col16a1Q8BLX7 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Col16a1Q8BLX7 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC28.18■■■□□ 2.1
Col16a1Q8BLX7 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Col16a1Q8BLX7 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC28.17■■■□□ 2.1
Col16a1Q8BLX7 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC28.17■■■□□ 2.1
Col16a1Q8BLX7 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
Col16a1Q8BLX7 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
Col16a1Q8BLX7 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC28.16■■■□□ 2.1
Col16a1Q8BLX7 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC28.16■■■□□ 2.1
Col16a1Q8BLX7 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
Col16a1Q8BLX7 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC28.16■■■□□ 2.1
Col16a1Q8BLX7 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
Col16a1Q8BLX7 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
Col16a1Q8BLX7 Gm43173-201ENSMUST00000202246 593 ntBASIC28.15■■■□□ 2.1
Col16a1Q8BLX7 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
Col16a1Q8BLX7 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC28.14■■■□□ 2.1
Col16a1Q8BLX7 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC28.14■■■□□ 2.1
Col16a1Q8BLX7 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
Col16a1Q8BLX7 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC28.13■■■□□ 2.09
Col16a1Q8BLX7 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
Col16a1Q8BLX7 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
Col16a1Q8BLX7 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC28.13■■■□□ 2.09
Col16a1Q8BLX7 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC28.13■■■□□ 2.09
Col16a1Q8BLX7 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC28.12■■■□□ 2.09
Col16a1Q8BLX7 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC28.12■■■□□ 2.09
Col16a1Q8BLX7 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
Col16a1Q8BLX7 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
Col16a1Q8BLX7 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC28.12■■■□□ 2.09
Col16a1Q8BLX7 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC28.12■■■□□ 2.09
Col16a1Q8BLX7 Gm12251-201ENSMUST00000117893 792 ntBASIC28.11■■■□□ 2.09
Col16a1Q8BLX7 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC28.11■■■□□ 2.09
Col16a1Q8BLX7 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
Col16a1Q8BLX7 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC28.11■■■□□ 2.09
Col16a1Q8BLX7 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC28.11■■■□□ 2.09
Col16a1Q8BLX7 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC28.11■■■□□ 2.09
Col16a1Q8BLX7 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
Col16a1Q8BLX7 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
Col16a1Q8BLX7 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
Col16a1Q8BLX7 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
Col16a1Q8BLX7 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
Col16a1Q8BLX7 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
Col16a1Q8BLX7 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
Col16a1Q8BLX7 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
Col16a1Q8BLX7 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
Col16a1Q8BLX7 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
Col16a1Q8BLX7 Gm10657-201ENSMUST00000193528 1031 ntBASIC28.08■■■□□ 2.09
Col16a1Q8BLX7 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC28.08■■■□□ 2.09
Col16a1Q8BLX7 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC28.07■■■□□ 2.08
Col16a1Q8BLX7 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC28.07■■■□□ 2.08
Col16a1Q8BLX7 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
Col16a1Q8BLX7 Kdm3b-204ENSMUST00000224715 2032 ntBASIC28.07■■■□□ 2.08
Col16a1Q8BLX7 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC28.07■■■□□ 2.08
Col16a1Q8BLX7 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
Col16a1Q8BLX7 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC28.07■■■□□ 2.08
Col16a1Q8BLX7 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
Col16a1Q8BLX7 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC28.07■■■□□ 2.08
Col16a1Q8BLX7 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
Col16a1Q8BLX7 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC28.06■■■□□ 2.08
Col16a1Q8BLX7 Gm5874-201ENSMUST00000096101 508 ntBASIC28.06■■■□□ 2.08
Col16a1Q8BLX7 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC28.06■■■□□ 2.08
Col16a1Q8BLX7 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC28.06■■■□□ 2.08
Col16a1Q8BLX7 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
Col16a1Q8BLX7 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC28.05■■■□□ 2.08
Col16a1Q8BLX7 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
Col16a1Q8BLX7 Gm8493-201ENSMUST00000196881 489 ntBASIC28.05■■■□□ 2.08
Col16a1Q8BLX7 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
Col16a1Q8BLX7 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
Col16a1Q8BLX7 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
Col16a1Q8BLX7 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
Col16a1Q8BLX7 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
Col16a1Q8BLX7 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
Col16a1Q8BLX7 Wdr70-203ENSMUST00000227371 1130 ntBASIC28.03■■■□□ 2.08
Col16a1Q8BLX7 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
Col16a1Q8BLX7 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
Col16a1Q8BLX7 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
Col16a1Q8BLX7 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
Col16a1Q8BLX7 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
Col16a1Q8BLX7 Gm8770-201ENSMUST00000121113 1109 ntBASIC28.02■■■□□ 2.08
Col16a1Q8BLX7 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC28.02■■■□□ 2.08
Col16a1Q8BLX7 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.08
Col16a1Q8BLX7 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC28.01■■■□□ 2.07
Col16a1Q8BLX7 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC28.01■■■□□ 2.07
Col16a1Q8BLX7 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
Col16a1Q8BLX7 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
Col16a1Q8BLX7 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC28■■■□□ 2.07
Col16a1Q8BLX7 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC28■■■□□ 2.07
Col16a1Q8BLX7 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
Col16a1Q8BLX7 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC28■■■□□ 2.07
Col16a1Q8BLX7 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC28■■■□□ 2.07
Col16a1Q8BLX7 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC28■■■□□ 2.07
Col16a1Q8BLX7 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC28■■■□□ 2.07
Retrieved 100 of 76,532 protein–RNA pairs in 13.6 ms