Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Chmp2bQ8BJF9 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Chmp2bQ8BJF9 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1
Chmp2bQ8BJF9 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Chmp2bQ8BJF9 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC21.32■■□□□ 1
Chmp2bQ8BJF9 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Chmp2bQ8BJF9 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC21.32■■□□□ 1
Chmp2bQ8BJF9 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Chmp2bQ8BJF9 Gm7332-201ENSMUST00000118351 454 ntBASIC21.31■■□□□ 1
Chmp2bQ8BJF9 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC21.31■■□□□ 1
Chmp2bQ8BJF9 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Chmp2bQ8BJF9 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Chmp2bQ8BJF9 Hsf1-207ENSMUST00000228371 2102 ntBASIC21.31■■□□□ 1
Chmp2bQ8BJF9 AC164883.3-201ENSMUST00000227396 1774 ntBASIC21.31■■□□□ 1
Chmp2bQ8BJF9 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC21.3■■□□□ 1
Chmp2bQ8BJF9 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Chmp2bQ8BJF9 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Chmp2bQ8BJF9 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Chmp2bQ8BJF9 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC21.3■■□□□ 1
Chmp2bQ8BJF9 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Chmp2bQ8BJF9 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Chmp2bQ8BJF9 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Chmp2bQ8BJF9 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Chmp2bQ8BJF9 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC21.29■■□□□ 1
Chmp2bQ8BJF9 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC21.29■■□□□ 1
Chmp2bQ8BJF9 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Chmp2bQ8BJF9 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Chmp2bQ8BJF9 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC21.29■■□□□ 1
Chmp2bQ8BJF9 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC21.28■■□□□ 1
Chmp2bQ8BJF9 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Chmp2bQ8BJF9 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Chmp2bQ8BJF9 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC21.28■■□□□ 1
Chmp2bQ8BJF9 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC21.28■■□□□ 1
Chmp2bQ8BJF9 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Chmp2bQ8BJF9 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Chmp2bQ8BJF9 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC21.28■■□□□ 1
Chmp2bQ8BJF9 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Chmp2bQ8BJF9 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Chmp2bQ8BJF9 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC21.28■■□□□ 1
Chmp2bQ8BJF9 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Chmp2bQ8BJF9 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Chmp2bQ8BJF9 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC21.27■■□□□ 1
Chmp2bQ8BJF9 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Chmp2bQ8BJF9 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC21.27■■□□□ 1
Chmp2bQ8BJF9 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Chmp2bQ8BJF9 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC21.27■■□□□ 1
Chmp2bQ8BJF9 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC21.27■■□□□ 1
Chmp2bQ8BJF9 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Chmp2bQ8BJF9 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC21.26■□□□□ 0.99
Chmp2bQ8BJF9 AC158990.1-201ENSMUST00000221450 2016 ntBASIC21.26■□□□□ 0.99
Chmp2bQ8BJF9 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Chmp2bQ8BJF9 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC21.26■□□□□ 0.99
Chmp2bQ8BJF9 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Chmp2bQ8BJF9 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Chmp2bQ8BJF9 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Chmp2bQ8BJF9 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Chmp2bQ8BJF9 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Chmp2bQ8BJF9 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Chmp2bQ8BJF9 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Chmp2bQ8BJF9 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Chmp2bQ8BJF9 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Chmp2bQ8BJF9 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Chmp2bQ8BJF9 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Chmp2bQ8BJF9 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Chmp2bQ8BJF9 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Chmp2bQ8BJF9 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Chmp2bQ8BJF9 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Chmp2bQ8BJF9 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Chmp2bQ8BJF9 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Chmp2bQ8BJF9 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Chmp2bQ8BJF9 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Chmp2bQ8BJF9 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Chmp2bQ8BJF9 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC21.23■□□□□ 0.99
Chmp2bQ8BJF9 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Chmp2bQ8BJF9 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Chmp2bQ8BJF9 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Chmp2bQ8BJF9 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC21.23■□□□□ 0.99
Chmp2bQ8BJF9 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Chmp2bQ8BJF9 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Chmp2bQ8BJF9 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Chmp2bQ8BJF9 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Chmp2bQ8BJF9 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Chmp2bQ8BJF9 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Chmp2bQ8BJF9 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Chmp2bQ8BJF9 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Chmp2bQ8BJF9 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Chmp2bQ8BJF9 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Chmp2bQ8BJF9 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Chmp2bQ8BJF9 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Chmp2bQ8BJF9 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC21.21■□□□□ 0.99
Chmp2bQ8BJF9 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC21.21■□□□□ 0.99
Chmp2bQ8BJF9 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Chmp2bQ8BJF9 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC21.21■□□□□ 0.99
Chmp2bQ8BJF9 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC21.21■□□□□ 0.99
Chmp2bQ8BJF9 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Chmp2bQ8BJF9 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Chmp2bQ8BJF9 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC21.2■□□□□ 0.98
Chmp2bQ8BJF9 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Chmp2bQ8BJF9 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Chmp2bQ8BJF9 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 15 ms