Protein–RNA interactions for Protein: Q8BJA3

Hmbox1, Homeobox-containing protein 1, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmbox1Q8BJA3 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Hmbox1Q8BJA3 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.3■□□□□ 0.84
Hmbox1Q8BJA3 AC153524.1-201ENSMUST00000220436 1935 ntBASIC20.3■□□□□ 0.84
Hmbox1Q8BJA3 Gm16464-201ENSMUST00000117815 1095 ntBASIC20.3■□□□□ 0.84
Hmbox1Q8BJA3 Gm27454-201ENSMUST00000185090 204 ntBASIC20.3■□□□□ 0.84
Hmbox1Q8BJA3 Gm8495-201ENSMUST00000188740 694 ntBASIC20.3■□□□□ 0.84
Hmbox1Q8BJA3 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC20.3■□□□□ 0.84
Hmbox1Q8BJA3 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Hmbox1Q8BJA3 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Hmbox1Q8BJA3 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Hmbox1Q8BJA3 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Hmbox1Q8BJA3 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC20.29■□□□□ 0.84
Hmbox1Q8BJA3 Gm45417-201ENSMUST00000209533 758 ntBASIC20.29■□□□□ 0.84
Hmbox1Q8BJA3 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
Hmbox1Q8BJA3 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC20.29■□□□□ 0.84
Hmbox1Q8BJA3 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Hmbox1Q8BJA3 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
Hmbox1Q8BJA3 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Hmbox1Q8BJA3 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Hmbox1Q8BJA3 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Hmbox1Q8BJA3 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Hmbox1Q8BJA3 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Hmbox1Q8BJA3 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Hmbox1Q8BJA3 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Hmbox1Q8BJA3 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC20.28■□□□□ 0.84
Hmbox1Q8BJA3 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Hmbox1Q8BJA3 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Hmbox1Q8BJA3 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Hmbox1Q8BJA3 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Hmbox1Q8BJA3 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Hmbox1Q8BJA3 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Hmbox1Q8BJA3 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Hmbox1Q8BJA3 Gm12922-201ENSMUST00000120626 809 ntBASIC20.26■□□□□ 0.83
Hmbox1Q8BJA3 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Hmbox1Q8BJA3 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Hmbox1Q8BJA3 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
Hmbox1Q8BJA3 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
Hmbox1Q8BJA3 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Hmbox1Q8BJA3 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
Hmbox1Q8BJA3 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Hmbox1Q8BJA3 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC20.25■□□□□ 0.83
Hmbox1Q8BJA3 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Hmbox1Q8BJA3 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC20.25■□□□□ 0.83
Hmbox1Q8BJA3 Gm29257-201ENSMUST00000186115 639 ntBASIC20.25■□□□□ 0.83
Hmbox1Q8BJA3 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Hmbox1Q8BJA3 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Hmbox1Q8BJA3 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Hmbox1Q8BJA3 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Hmbox1Q8BJA3 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Hmbox1Q8BJA3 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Hmbox1Q8BJA3 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Hmbox1Q8BJA3 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
Hmbox1Q8BJA3 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Hmbox1Q8BJA3 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Hmbox1Q8BJA3 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Hmbox1Q8BJA3 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Hmbox1Q8BJA3 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Hmbox1Q8BJA3 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC20.23■□□□□ 0.83
Hmbox1Q8BJA3 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC20.23■□□□□ 0.83
Hmbox1Q8BJA3 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Hmbox1Q8BJA3 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Hmbox1Q8BJA3 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Hmbox1Q8BJA3 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Hmbox1Q8BJA3 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Hmbox1Q8BJA3 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Hmbox1Q8BJA3 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Hmbox1Q8BJA3 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Hmbox1Q8BJA3 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Hmbox1Q8BJA3 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Hmbox1Q8BJA3 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Hmbox1Q8BJA3 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC20.22■□□□□ 0.83
Hmbox1Q8BJA3 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Hmbox1Q8BJA3 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC20.22■□□□□ 0.83
Hmbox1Q8BJA3 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Hmbox1Q8BJA3 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Hmbox1Q8BJA3 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Hmbox1Q8BJA3 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Hmbox1Q8BJA3 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC20.22■□□□□ 0.83
Hmbox1Q8BJA3 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC20.22■□□□□ 0.83
Hmbox1Q8BJA3 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Hmbox1Q8BJA3 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Hmbox1Q8BJA3 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Hmbox1Q8BJA3 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC20.21■□□□□ 0.83
Hmbox1Q8BJA3 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC20.21■□□□□ 0.83
Hmbox1Q8BJA3 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
Hmbox1Q8BJA3 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Hmbox1Q8BJA3 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC20.21■□□□□ 0.83
Hmbox1Q8BJA3 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC20.21■□□□□ 0.83
Hmbox1Q8BJA3 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Hmbox1Q8BJA3 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Hmbox1Q8BJA3 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Hmbox1Q8BJA3 Spcs1-207ENSMUST00000228767 1008 ntBASIC20.21■□□□□ 0.83
Hmbox1Q8BJA3 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Hmbox1Q8BJA3 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Hmbox1Q8BJA3 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Hmbox1Q8BJA3 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Hmbox1Q8BJA3 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Hmbox1Q8BJA3 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC20.2■□□□□ 0.82
Hmbox1Q8BJA3 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC20.2■□□□□ 0.82
Hmbox1Q8BJA3 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms