Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Rnf38Q8BI21 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rnf38Q8BI21 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Rnf38Q8BI21 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Rnf38Q8BI21 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Rnf38Q8BI21 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Rnf38Q8BI21 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC20.12■□□□□ 0.81
Rnf38Q8BI21 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rnf38Q8BI21 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Rnf38Q8BI21 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rnf38Q8BI21 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Rnf38Q8BI21 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rnf38Q8BI21 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rnf38Q8BI21 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rnf38Q8BI21 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC20.11■□□□□ 0.81
Rnf38Q8BI21 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rnf38Q8BI21 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Rnf38Q8BI21 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Rnf38Q8BI21 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rnf38Q8BI21 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rnf38Q8BI21 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Rnf38Q8BI21 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Rnf38Q8BI21 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Rnf38Q8BI21 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC20.1■□□□□ 0.81
Rnf38Q8BI21 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC20.1■□□□□ 0.81
Rnf38Q8BI21 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Rnf38Q8BI21 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rnf38Q8BI21 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Rnf38Q8BI21 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Rnf38Q8BI21 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rnf38Q8BI21 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Rnf38Q8BI21 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Rnf38Q8BI21 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Rnf38Q8BI21 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rnf38Q8BI21 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC20.09■□□□□ 0.81
Rnf38Q8BI21 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rnf38Q8BI21 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC20.09■□□□□ 0.81
Rnf38Q8BI21 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rnf38Q8BI21 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Rnf38Q8BI21 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rnf38Q8BI21 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rnf38Q8BI21 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Rnf38Q8BI21 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Rnf38Q8BI21 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC20.08■□□□□ 0.81
Rnf38Q8BI21 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rnf38Q8BI21 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rnf38Q8BI21 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rnf38Q8BI21 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rnf38Q8BI21 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Rnf38Q8BI21 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC20.08■□□□□ 0.81
Rnf38Q8BI21 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Rnf38Q8BI21 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Rnf38Q8BI21 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Rnf38Q8BI21 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Rnf38Q8BI21 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Rnf38Q8BI21 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Rnf38Q8BI21 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rnf38Q8BI21 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rnf38Q8BI21 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Rnf38Q8BI21 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Rnf38Q8BI21 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rnf38Q8BI21 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rnf38Q8BI21 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Rnf38Q8BI21 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rnf38Q8BI21 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rnf38Q8BI21 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rnf38Q8BI21 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Rnf38Q8BI21 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rnf38Q8BI21 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Rnf38Q8BI21 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Rnf38Q8BI21 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Rnf38Q8BI21 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rnf38Q8BI21 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rnf38Q8BI21 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC20.06■□□□□ 0.8
Rnf38Q8BI21 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Rnf38Q8BI21 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rnf38Q8BI21 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rnf38Q8BI21 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rnf38Q8BI21 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Rnf38Q8BI21 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rnf38Q8BI21 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rnf38Q8BI21 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rnf38Q8BI21 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Rnf38Q8BI21 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Rnf38Q8BI21 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Rnf38Q8BI21 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Rnf38Q8BI21 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Rnf38Q8BI21 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Rnf38Q8BI21 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Rnf38Q8BI21 Gm44949-201ENSMUST00000206423 1450 ntBASIC20.05■□□□□ 0.8
Rnf38Q8BI21 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Rnf38Q8BI21 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC20.04■□□□□ 0.8
Rnf38Q8BI21 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Rnf38Q8BI21 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rnf38Q8BI21 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rnf38Q8BI21 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Rnf38Q8BI21 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Rnf38Q8BI21 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
Rnf38Q8BI21 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC20.03■□□□□ 0.8
Rnf38Q8BI21 Gm43592-201ENSMUST00000196922 1165 ntBASIC20.03■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms