Protein–RNA interactions for Protein: Q8BGY9

Slc5a7, High affinity choline transporter 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc5a7Q8BGY9 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Slc5a7Q8BGY9 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Slc5a7Q8BGY9 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Slc5a7Q8BGY9 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Slc5a7Q8BGY9 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Slc5a7Q8BGY9 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Slc5a7Q8BGY9 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Slc5a7Q8BGY9 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Slc5a7Q8BGY9 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Slc5a7Q8BGY9 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Slc5a7Q8BGY9 AC154454.1-201ENSMUST00000225253 216 ntBASIC18.3■□□□□ 0.52
Slc5a7Q8BGY9 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Slc5a7Q8BGY9 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Slc5a7Q8BGY9 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Slc5a7Q8BGY9 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC18.3■□□□□ 0.52
Slc5a7Q8BGY9 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Slc5a7Q8BGY9 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Slc5a7Q8BGY9 Gm44949-201ENSMUST00000206423 1450 ntBASIC18.29■□□□□ 0.52
Slc5a7Q8BGY9 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Slc5a7Q8BGY9 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Slc5a7Q8BGY9 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Slc5a7Q8BGY9 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Slc5a7Q8BGY9 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Slc5a7Q8BGY9 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Slc5a7Q8BGY9 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC18.28■□□□□ 0.52
Slc5a7Q8BGY9 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC18.28■□□□□ 0.52
Slc5a7Q8BGY9 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC18.28■□□□□ 0.52
Slc5a7Q8BGY9 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Slc5a7Q8BGY9 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Slc5a7Q8BGY9 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Slc5a7Q8BGY9 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Slc5a7Q8BGY9 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Slc5a7Q8BGY9 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Slc5a7Q8BGY9 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Slc5a7Q8BGY9 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC18.27■□□□□ 0.52
Slc5a7Q8BGY9 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
Slc5a7Q8BGY9 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Slc5a7Q8BGY9 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Slc5a7Q8BGY9 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Slc5a7Q8BGY9 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC18.26■□□□□ 0.51
Slc5a7Q8BGY9 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Slc5a7Q8BGY9 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Slc5a7Q8BGY9 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Slc5a7Q8BGY9 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Slc5a7Q8BGY9 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Slc5a7Q8BGY9 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Slc5a7Q8BGY9 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Slc5a7Q8BGY9 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Slc5a7Q8BGY9 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Slc5a7Q8BGY9 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Slc5a7Q8BGY9 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Slc5a7Q8BGY9 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC18.24■□□□□ 0.51
Slc5a7Q8BGY9 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Slc5a7Q8BGY9 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Slc5a7Q8BGY9 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Slc5a7Q8BGY9 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Slc5a7Q8BGY9 Gm9939-201ENSMUST00000067161 1154 ntBASIC18.24■□□□□ 0.51
Slc5a7Q8BGY9 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Slc5a7Q8BGY9 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Slc5a7Q8BGY9 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Slc5a7Q8BGY9 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Slc5a7Q8BGY9 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Slc5a7Q8BGY9 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC18.23■□□□□ 0.51
Slc5a7Q8BGY9 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Slc5a7Q8BGY9 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Slc5a7Q8BGY9 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Slc5a7Q8BGY9 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Slc5a7Q8BGY9 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Slc5a7Q8BGY9 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Slc5a7Q8BGY9 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Slc5a7Q8BGY9 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Slc5a7Q8BGY9 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Slc5a7Q8BGY9 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Slc5a7Q8BGY9 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Slc5a7Q8BGY9 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Slc5a7Q8BGY9 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Slc5a7Q8BGY9 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Slc5a7Q8BGY9 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Slc5a7Q8BGY9 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC18.22■□□□□ 0.51
Slc5a7Q8BGY9 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Slc5a7Q8BGY9 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Slc5a7Q8BGY9 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Slc5a7Q8BGY9 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Slc5a7Q8BGY9 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Slc5a7Q8BGY9 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Slc5a7Q8BGY9 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Slc5a7Q8BGY9 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Slc5a7Q8BGY9 Gm6821-201ENSMUST00000107540 542 ntBASIC18.21■□□□□ 0.51
Slc5a7Q8BGY9 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Slc5a7Q8BGY9 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Slc5a7Q8BGY9 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Slc5a7Q8BGY9 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Slc5a7Q8BGY9 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Slc5a7Q8BGY9 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Slc5a7Q8BGY9 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC18.2■□□□□ 0.5
Slc5a7Q8BGY9 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Slc5a7Q8BGY9 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Slc5a7Q8BGY9 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Slc5a7Q8BGY9 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Slc5a7Q8BGY9 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms