Protein–RNA interactions for Protein: Q80ZA4

Pkhd1l1, Fibrocystin-L, mousemouse

Predictions only

Length 4,249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkhd1l1Q80ZA4 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Pkhd1l1Q80ZA4 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Pkhd1l1Q80ZA4 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC12.75□□□□□ -0.37
Pkhd1l1Q80ZA4 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pkhd1l1Q80ZA4 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Pkhd1l1Q80ZA4 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC12.74□□□□□ -0.37
Pkhd1l1Q80ZA4 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Pkhd1l1Q80ZA4 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Pkhd1l1Q80ZA4 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC12.74□□□□□ -0.37
Pkhd1l1Q80ZA4 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Pkhd1l1Q80ZA4 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
Pkhd1l1Q80ZA4 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pkhd1l1Q80ZA4 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
Pkhd1l1Q80ZA4 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pkhd1l1Q80ZA4 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pkhd1l1Q80ZA4 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Pkhd1l1Q80ZA4 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pkhd1l1Q80ZA4 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pkhd1l1Q80ZA4 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC12.73□□□□□ -0.37
Pkhd1l1Q80ZA4 Gm27405-201ENSMUST00000184201 112 ntBASIC12.72□□□□□ -0.37
Pkhd1l1Q80ZA4 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pkhd1l1Q80ZA4 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pkhd1l1Q80ZA4 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pkhd1l1Q80ZA4 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC12.72□□□□□ -0.37
Pkhd1l1Q80ZA4 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC12.72□□□□□ -0.37
Pkhd1l1Q80ZA4 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pkhd1l1Q80ZA4 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pkhd1l1Q80ZA4 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pkhd1l1Q80ZA4 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
Pkhd1l1Q80ZA4 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pkhd1l1Q80ZA4 Mir7075-201ENSMUST00000184187 82 ntBASIC12.71□□□□□ -0.38
Pkhd1l1Q80ZA4 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Pkhd1l1Q80ZA4 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pkhd1l1Q80ZA4 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC12.7□□□□□ -0.38
Pkhd1l1Q80ZA4 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pkhd1l1Q80ZA4 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC12.7□□□□□ -0.38
Pkhd1l1Q80ZA4 Kdm3b-204ENSMUST00000224715 2032 ntBASIC12.7□□□□□ -0.38
Pkhd1l1Q80ZA4 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
Pkhd1l1Q80ZA4 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pkhd1l1Q80ZA4 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pkhd1l1Q80ZA4 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Pkhd1l1Q80ZA4 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pkhd1l1Q80ZA4 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pkhd1l1Q80ZA4 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pkhd1l1Q80ZA4 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pkhd1l1Q80ZA4 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pkhd1l1Q80ZA4 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC12.7□□□□□ -0.38
Pkhd1l1Q80ZA4 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC12.69□□□□□ -0.38
Pkhd1l1Q80ZA4 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pkhd1l1Q80ZA4 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC12.69□□□□□ -0.38
Pkhd1l1Q80ZA4 Gm42569-201ENSMUST00000200539 472 ntBASIC12.69□□□□□ -0.38
Pkhd1l1Q80ZA4 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pkhd1l1Q80ZA4 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC12.69□□□□□ -0.38
Pkhd1l1Q80ZA4 Gm12669-201ENSMUST00000122162 1009 ntBASIC12.69□□□□□ -0.38
Pkhd1l1Q80ZA4 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pkhd1l1Q80ZA4 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Pkhd1l1Q80ZA4 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pkhd1l1Q80ZA4 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC12.69□□□□□ -0.38
Pkhd1l1Q80ZA4 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC12.69□□□□□ -0.38
Pkhd1l1Q80ZA4 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC12.68□□□□□ -0.38
Pkhd1l1Q80ZA4 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pkhd1l1Q80ZA4 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Pkhd1l1Q80ZA4 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pkhd1l1Q80ZA4 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pkhd1l1Q80ZA4 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pkhd1l1Q80ZA4 Gm8493-201ENSMUST00000196881 489 ntBASIC12.68□□□□□ -0.38
Pkhd1l1Q80ZA4 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC12.68□□□□□ -0.38
Pkhd1l1Q80ZA4 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC12.68□□□□□ -0.38
Pkhd1l1Q80ZA4 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Pkhd1l1Q80ZA4 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pkhd1l1Q80ZA4 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pkhd1l1Q80ZA4 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pkhd1l1Q80ZA4 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC12.68□□□□□ -0.38
Pkhd1l1Q80ZA4 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Pkhd1l1Q80ZA4 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pkhd1l1Q80ZA4 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pkhd1l1Q80ZA4 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pkhd1l1Q80ZA4 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pkhd1l1Q80ZA4 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pkhd1l1Q80ZA4 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pkhd1l1Q80ZA4 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC12.67□□□□□ -0.38
Pkhd1l1Q80ZA4 Spcs1-204ENSMUST00000226782 949 ntBASIC12.67□□□□□ -0.38
Pkhd1l1Q80ZA4 Gm10493-201ENSMUST00000097270 612 ntBASIC12.67□□□□□ -0.38
Pkhd1l1Q80ZA4 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pkhd1l1Q80ZA4 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pkhd1l1Q80ZA4 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pkhd1l1Q80ZA4 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pkhd1l1Q80ZA4 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Pkhd1l1Q80ZA4 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pkhd1l1Q80ZA4 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pkhd1l1Q80ZA4 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pkhd1l1Q80ZA4 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Pkhd1l1Q80ZA4 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC12.66□□□□□ -0.38
Pkhd1l1Q80ZA4 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Pkhd1l1Q80ZA4 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Pkhd1l1Q80ZA4 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC12.66□□□□□ -0.38
Pkhd1l1Q80ZA4 Gm43530-201ENSMUST00000195920 274 ntBASIC12.66□□□□□ -0.38
Pkhd1l1Q80ZA4 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pkhd1l1Q80ZA4 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Pkhd1l1Q80ZA4 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms