Protein–RNA interactions for Protein: Q80YF6

Upk3b, Uroplakin-3b, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bQ80YF6 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Upk3bQ80YF6 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Upk3bQ80YF6 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Upk3bQ80YF6 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Upk3bQ80YF6 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Upk3bQ80YF6 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Upk3bQ80YF6 Gm11687-201ENSMUST00000118911 886 ntBASIC17.64■□□□□ 0.41
Upk3bQ80YF6 Gm5987-201ENSMUST00000196433 1151 ntBASIC17.64■□□□□ 0.41
Upk3bQ80YF6 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Upk3bQ80YF6 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Upk3bQ80YF6 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Upk3bQ80YF6 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Upk3bQ80YF6 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Upk3bQ80YF6 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Upk3bQ80YF6 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Upk3bQ80YF6 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Upk3bQ80YF6 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Upk3bQ80YF6 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Upk3bQ80YF6 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Upk3bQ80YF6 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Upk3bQ80YF6 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC17.63■□□□□ 0.41
Upk3bQ80YF6 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Upk3bQ80YF6 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Upk3bQ80YF6 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Upk3bQ80YF6 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Upk3bQ80YF6 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Upk3bQ80YF6 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Upk3bQ80YF6 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC17.62■□□□□ 0.41
Upk3bQ80YF6 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Upk3bQ80YF6 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Upk3bQ80YF6 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Upk3bQ80YF6 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Upk3bQ80YF6 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Upk3bQ80YF6 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Upk3bQ80YF6 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Upk3bQ80YF6 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Upk3bQ80YF6 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Upk3bQ80YF6 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Upk3bQ80YF6 Notumos-201ENSMUST00000151998 2659 ntBASIC17.6■□□□□ 0.41
Upk3bQ80YF6 Gm5913-201ENSMUST00000119397 1399 ntBASIC17.6■□□□□ 0.41
Upk3bQ80YF6 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Upk3bQ80YF6 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Upk3bQ80YF6 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Upk3bQ80YF6 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Upk3bQ80YF6 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC17.59■□□□□ 0.41
Upk3bQ80YF6 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Upk3bQ80YF6 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Upk3bQ80YF6 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC17.59■□□□□ 0.41
Upk3bQ80YF6 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC17.59■□□□□ 0.41
Upk3bQ80YF6 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Upk3bQ80YF6 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Upk3bQ80YF6 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Upk3bQ80YF6 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Upk3bQ80YF6 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Upk3bQ80YF6 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Upk3bQ80YF6 Nsd1-206ENSMUST00000224918 1001 ntBASIC17.58■□□□□ 0.4
Upk3bQ80YF6 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Upk3bQ80YF6 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Upk3bQ80YF6 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Upk3bQ80YF6 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Upk3bQ80YF6 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Upk3bQ80YF6 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Upk3bQ80YF6 AC151971.4-201ENSMUST00000214717 704 ntBASIC17.57■□□□□ 0.4
Upk3bQ80YF6 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Upk3bQ80YF6 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Upk3bQ80YF6 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Upk3bQ80YF6 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Upk3bQ80YF6 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Upk3bQ80YF6 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Upk3bQ80YF6 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Upk3bQ80YF6 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Upk3bQ80YF6 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Upk3bQ80YF6 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Upk3bQ80YF6 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Upk3bQ80YF6 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Upk3bQ80YF6 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Upk3bQ80YF6 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Upk3bQ80YF6 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
Upk3bQ80YF6 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Upk3bQ80YF6 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Upk3bQ80YF6 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Upk3bQ80YF6 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC17.54■□□□□ 0.4
Upk3bQ80YF6 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Upk3bQ80YF6 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Upk3bQ80YF6 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Upk3bQ80YF6 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Upk3bQ80YF6 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Upk3bQ80YF6 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Upk3bQ80YF6 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Upk3bQ80YF6 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Upk3bQ80YF6 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
Upk3bQ80YF6 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Upk3bQ80YF6 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC17.53■□□□□ 0.4
Upk3bQ80YF6 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Upk3bQ80YF6 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Upk3bQ80YF6 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Upk3bQ80YF6 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Upk3bQ80YF6 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Upk3bQ80YF6 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Upk3bQ80YF6 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC17.52■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms