Protein–RNA interactions for Protein: Q80XG9

Lrrtm4, Leucine-rich repeat transmembrane neuronal protein 4, mousemouse

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrtm4Q80XG9 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Lrrtm4Q80XG9 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Lrrtm4Q80XG9 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC20.41■□□□□ 0.86
Lrrtm4Q80XG9 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Lrrtm4Q80XG9 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC20.4■□□□□ 0.86
Lrrtm4Q80XG9 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC20.4■□□□□ 0.86
Lrrtm4Q80XG9 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC20.4■□□□□ 0.86
Lrrtm4Q80XG9 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC20.4■□□□□ 0.86
Lrrtm4Q80XG9 Gm22238-201ENSMUST00000175222 88 ntBASIC20.4■□□□□ 0.86
Lrrtm4Q80XG9 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Lrrtm4Q80XG9 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Lrrtm4Q80XG9 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Lrrtm4Q80XG9 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC20.39■□□□□ 0.86
Lrrtm4Q80XG9 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.86
Lrrtm4Q80XG9 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Lrrtm4Q80XG9 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Lrrtm4Q80XG9 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC20.39■□□□□ 0.85
Lrrtm4Q80XG9 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Lrrtm4Q80XG9 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
Lrrtm4Q80XG9 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Lrrtm4Q80XG9 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Lrrtm4Q80XG9 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Lrrtm4Q80XG9 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Lrrtm4Q80XG9 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Lrrtm4Q80XG9 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Lrrtm4Q80XG9 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Lrrtm4Q80XG9 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC20.38■□□□□ 0.85
Lrrtm4Q80XG9 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Lrrtm4Q80XG9 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC20.38■□□□□ 0.85
Lrrtm4Q80XG9 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Lrrtm4Q80XG9 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Lrrtm4Q80XG9 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Lrrtm4Q80XG9 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Lrrtm4Q80XG9 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Lrrtm4Q80XG9 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Lrrtm4Q80XG9 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC20.37■□□□□ 0.85
Lrrtm4Q80XG9 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Lrrtm4Q80XG9 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC20.37■□□□□ 0.85
Lrrtm4Q80XG9 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC20.37■□□□□ 0.85
Lrrtm4Q80XG9 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Lrrtm4Q80XG9 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Lrrtm4Q80XG9 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Lrrtm4Q80XG9 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Lrrtm4Q80XG9 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC20.36■□□□□ 0.85
Lrrtm4Q80XG9 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Lrrtm4Q80XG9 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Lrrtm4Q80XG9 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Lrrtm4Q80XG9 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Lrrtm4Q80XG9 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC20.35■□□□□ 0.85
Lrrtm4Q80XG9 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Lrrtm4Q80XG9 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Lrrtm4Q80XG9 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Lrrtm4Q80XG9 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Lrrtm4Q80XG9 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Lrrtm4Q80XG9 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Lrrtm4Q80XG9 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Lrrtm4Q80XG9 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Lrrtm4Q80XG9 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Lrrtm4Q80XG9 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Lrrtm4Q80XG9 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Lrrtm4Q80XG9 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Lrrtm4Q80XG9 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Lrrtm4Q80XG9 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Lrrtm4Q80XG9 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Lrrtm4Q80XG9 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Lrrtm4Q80XG9 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Lrrtm4Q80XG9 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Lrrtm4Q80XG9 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Lrrtm4Q80XG9 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Lrrtm4Q80XG9 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Lrrtm4Q80XG9 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Lrrtm4Q80XG9 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Lrrtm4Q80XG9 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Lrrtm4Q80XG9 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Lrrtm4Q80XG9 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Lrrtm4Q80XG9 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Lrrtm4Q80XG9 Gm37415-201ENSMUST00000192265 2054 ntBASIC20.32■□□□□ 0.84
Lrrtm4Q80XG9 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Lrrtm4Q80XG9 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Lrrtm4Q80XG9 AC164883.3-201ENSMUST00000227396 1774 ntBASIC20.31■□□□□ 0.84
Lrrtm4Q80XG9 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Lrrtm4Q80XG9 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Lrrtm4Q80XG9 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Lrrtm4Q80XG9 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Lrrtm4Q80XG9 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Lrrtm4Q80XG9 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC20.3■□□□□ 0.84
Lrrtm4Q80XG9 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Lrrtm4Q80XG9 Gm26766-202ENSMUST00000227544 2347 ntBASIC20.3■□□□□ 0.84
Lrrtm4Q80XG9 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Lrrtm4Q80XG9 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Lrrtm4Q80XG9 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Lrrtm4Q80XG9 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Lrrtm4Q80XG9 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Lrrtm4Q80XG9 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Lrrtm4Q80XG9 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC20.29■□□□□ 0.84
Lrrtm4Q80XG9 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Lrrtm4Q80XG9 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Lrrtm4Q80XG9 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Lrrtm4Q80XG9 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Lrrtm4Q80XG9 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms