Protein–RNA interactions for Protein: Q80WV7

Srrm3, Serine/arginine repetitive matrix protein 3, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm3Q80WV7 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Srrm3Q80WV7 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Srrm3Q80WV7 Mir3960-201ENSMUST00000198213 73 ntBASIC21.7■■□□□ 1.06
Srrm3Q80WV7 Iqck-206ENSMUST00000208658 2891 ntBASIC21.7■■□□□ 1.06
Srrm3Q80WV7 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Srrm3Q80WV7 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC21.69■■□□□ 1.06
Srrm3Q80WV7 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Srrm3Q80WV7 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Srrm3Q80WV7 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC21.69■■□□□ 1.06
Srrm3Q80WV7 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
Srrm3Q80WV7 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
Srrm3Q80WV7 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
Srrm3Q80WV7 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
Srrm3Q80WV7 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC21.69■■□□□ 1.06
Srrm3Q80WV7 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Srrm3Q80WV7 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Srrm3Q80WV7 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Srrm3Q80WV7 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC21.68■■□□□ 1.06
Srrm3Q80WV7 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Srrm3Q80WV7 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC21.67■■□□□ 1.06
Srrm3Q80WV7 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC21.67■■□□□ 1.06
Srrm3Q80WV7 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC21.67■■□□□ 1.06
Srrm3Q80WV7 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Srrm3Q80WV7 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Srrm3Q80WV7 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Srrm3Q80WV7 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Srrm3Q80WV7 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Srrm3Q80WV7 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Srrm3Q80WV7 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Srrm3Q80WV7 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
Srrm3Q80WV7 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
Srrm3Q80WV7 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
Srrm3Q80WV7 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Srrm3Q80WV7 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
Srrm3Q80WV7 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Srrm3Q80WV7 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Srrm3Q80WV7 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Srrm3Q80WV7 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Srrm3Q80WV7 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Srrm3Q80WV7 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Srrm3Q80WV7 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Srrm3Q80WV7 AC093043.1-201ENSMUST00000226700 898 ntBASIC21.65■■□□□ 1.06
Srrm3Q80WV7 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Srrm3Q80WV7 Snhg20-203ENSMUST00000182811 2153 ntBASIC21.65■■□□□ 1.06
Srrm3Q80WV7 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
Srrm3Q80WV7 AC164883.3-201ENSMUST00000227396 1774 ntBASIC21.64■■□□□ 1.06
Srrm3Q80WV7 Gm10420-201ENSMUST00000121713 882 ntBASIC21.64■■□□□ 1.05
Srrm3Q80WV7 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Srrm3Q80WV7 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Srrm3Q80WV7 Gm45364-201ENSMUST00000210883 159 ntBASIC21.64■■□□□ 1.05
Srrm3Q80WV7 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Srrm3Q80WV7 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
Srrm3Q80WV7 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC21.64■■□□□ 1.05
Srrm3Q80WV7 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
Srrm3Q80WV7 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC21.63■■□□□ 1.05
Srrm3Q80WV7 AC122317.2-201ENSMUST00000218708 1248 ntBASIC21.63■■□□□ 1.05
Srrm3Q80WV7 Rps24-207ENSMUST00000224568 714 ntBASIC21.63■■□□□ 1.05
Srrm3Q80WV7 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Srrm3Q80WV7 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Srrm3Q80WV7 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Srrm3Q80WV7 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Srrm3Q80WV7 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC21.62■■□□□ 1.05
Srrm3Q80WV7 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Srrm3Q80WV7 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Srrm3Q80WV7 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Srrm3Q80WV7 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
Srrm3Q80WV7 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Srrm3Q80WV7 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Srrm3Q80WV7 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Srrm3Q80WV7 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Srrm3Q80WV7 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
Srrm3Q80WV7 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Srrm3Q80WV7 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Srrm3Q80WV7 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
Srrm3Q80WV7 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Srrm3Q80WV7 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
Srrm3Q80WV7 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Srrm3Q80WV7 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Srrm3Q80WV7 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Srrm3Q80WV7 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
Srrm3Q80WV7 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Srrm3Q80WV7 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Srrm3Q80WV7 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC21.59■■□□□ 1.05
Srrm3Q80WV7 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Srrm3Q80WV7 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Srrm3Q80WV7 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
Srrm3Q80WV7 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Srrm3Q80WV7 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
Srrm3Q80WV7 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
Srrm3Q80WV7 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Srrm3Q80WV7 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC21.59■■□□□ 1.05
Srrm3Q80WV7 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC21.59■■□□□ 1.05
Srrm3Q80WV7 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Srrm3Q80WV7 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Srrm3Q80WV7 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Srrm3Q80WV7 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Srrm3Q80WV7 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC21.58■■□□□ 1.05
Srrm3Q80WV7 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.04
Srrm3Q80WV7 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Srrm3Q80WV7 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms