Protein–RNA interactions for Protein: Q80WC3

Tnrc18, Trinucleotide repeat-containing gene 18 protein, mousemouse

Predictions only

Length 2,878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnrc18Q80WC3 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Tnrc18Q80WC3 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Tnrc18Q80WC3 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC21.43■■□□□ 1.02
Tnrc18Q80WC3 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC21.43■■□□□ 1.02
Tnrc18Q80WC3 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Tnrc18Q80WC3 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Tnrc18Q80WC3 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Tnrc18Q80WC3 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC21.42■■□□□ 1.02
Tnrc18Q80WC3 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Tnrc18Q80WC3 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC21.42■■□□□ 1.02
Tnrc18Q80WC3 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Tnrc18Q80WC3 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Tnrc18Q80WC3 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
Tnrc18Q80WC3 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Tnrc18Q80WC3 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Tnrc18Q80WC3 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Tnrc18Q80WC3 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC21.41■■□□□ 1.02
Tnrc18Q80WC3 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Tnrc18Q80WC3 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Tnrc18Q80WC3 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Tnrc18Q80WC3 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Tnrc18Q80WC3 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC21.4■■□□□ 1.02
Tnrc18Q80WC3 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Tnrc18Q80WC3 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Tnrc18Q80WC3 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Tnrc18Q80WC3 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
Tnrc18Q80WC3 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Tnrc18Q80WC3 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC21.39■■□□□ 1.02
Tnrc18Q80WC3 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC21.39■■□□□ 1.02
Tnrc18Q80WC3 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC21.39■■□□□ 1.01
Tnrc18Q80WC3 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Tnrc18Q80WC3 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Tnrc18Q80WC3 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
Tnrc18Q80WC3 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Tnrc18Q80WC3 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC21.39■■□□□ 1.01
Tnrc18Q80WC3 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC21.39■■□□□ 1.01
Tnrc18Q80WC3 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
Tnrc18Q80WC3 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
Tnrc18Q80WC3 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Tnrc18Q80WC3 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Tnrc18Q80WC3 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Tnrc18Q80WC3 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Tnrc18Q80WC3 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC21.38■■□□□ 1.01
Tnrc18Q80WC3 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Tnrc18Q80WC3 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Tnrc18Q80WC3 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Tnrc18Q80WC3 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Tnrc18Q80WC3 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Tnrc18Q80WC3 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Tnrc18Q80WC3 Gm9870-201ENSMUST00000063874 645 ntBASIC21.37■■□□□ 1.01
Tnrc18Q80WC3 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Tnrc18Q80WC3 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Tnrc18Q80WC3 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Tnrc18Q80WC3 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Tnrc18Q80WC3 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
Tnrc18Q80WC3 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Tnrc18Q80WC3 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Tnrc18Q80WC3 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
Tnrc18Q80WC3 Gm10129-202ENSMUST00000193100 1316 ntBASIC21.35■■□□□ 1.01
Tnrc18Q80WC3 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Tnrc18Q80WC3 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Tnrc18Q80WC3 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Tnrc18Q80WC3 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Tnrc18Q80WC3 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC21.34■■□□□ 1.01
Tnrc18Q80WC3 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Tnrc18Q80WC3 AC099934.2-201ENSMUST00000196389 70 ntBASIC21.34■■□□□ 1.01
Tnrc18Q80WC3 AC156953.1-201ENSMUST00000196953 70 ntBASIC21.34■■□□□ 1.01
Tnrc18Q80WC3 AC157822.2-201ENSMUST00000200291 70 ntBASIC21.34■■□□□ 1.01
Tnrc18Q80WC3 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC21.34■■□□□ 1.01
Tnrc18Q80WC3 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC21.34■■□□□ 1.01
Tnrc18Q80WC3 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Tnrc18Q80WC3 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Tnrc18Q80WC3 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Tnrc18Q80WC3 Gm5576-201ENSMUST00000075809 1236 ntBASIC21.33■■□□□ 1.01
Tnrc18Q80WC3 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Tnrc18Q80WC3 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC21.33■■□□□ 1.01
Tnrc18Q80WC3 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Tnrc18Q80WC3 Kdm3b-204ENSMUST00000224715 2032 ntBASIC21.32■■□□□ 1
Tnrc18Q80WC3 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC21.32■■□□□ 1
Tnrc18Q80WC3 Gm12669-201ENSMUST00000122162 1009 ntBASIC21.32■■□□□ 1
Tnrc18Q80WC3 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC21.32■■□□□ 1
Tnrc18Q80WC3 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Tnrc18Q80WC3 Gm42569-201ENSMUST00000200539 472 ntBASIC21.31■■□□□ 1
Tnrc18Q80WC3 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC21.31■■□□□ 1
Tnrc18Q80WC3 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Tnrc18Q80WC3 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Tnrc18Q80WC3 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC21.3■■□□□ 1
Tnrc18Q80WC3 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC21.3■■□□□ 1
Tnrc18Q80WC3 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC21.3■■□□□ 1
Tnrc18Q80WC3 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC21.3■■□□□ 1
Tnrc18Q80WC3 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC21.3■■□□□ 1
Tnrc18Q80WC3 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Tnrc18Q80WC3 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Tnrc18Q80WC3 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC21.29■■□□□ 1
Tnrc18Q80WC3 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Tnrc18Q80WC3 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Tnrc18Q80WC3 CT025689.6-201ENSMUST00000224991 1104 ntBASIC21.29■■□□□ 1
Tnrc18Q80WC3 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Tnrc18Q80WC3 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Tnrc18Q80WC3 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC21.28■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms