Protein–RNA interactions for Protein: Q80VM9

Otop1, Otopetrin-1, mousemouse

Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otop1Q80VM9 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC20.07■□□□□ 0.8
Otop1Q80VM9 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Otop1Q80VM9 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Otop1Q80VM9 Gm28731-201ENSMUST00000185564 1569 ntBASIC20.07■□□□□ 0.8
Otop1Q80VM9 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Otop1Q80VM9 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC20.06■□□□□ 0.8
Otop1Q80VM9 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Otop1Q80VM9 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Otop1Q80VM9 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Otop1Q80VM9 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Otop1Q80VM9 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
Otop1Q80VM9 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
Otop1Q80VM9 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Otop1Q80VM9 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Otop1Q80VM9 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
Otop1Q80VM9 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Otop1Q80VM9 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Otop1Q80VM9 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Otop1Q80VM9 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Otop1Q80VM9 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC20.04■□□□□ 0.8
Otop1Q80VM9 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Otop1Q80VM9 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Otop1Q80VM9 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
Otop1Q80VM9 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
Otop1Q80VM9 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Otop1Q80VM9 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Otop1Q80VM9 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC20.04■□□□□ 0.8
Otop1Q80VM9 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC20.04■□□□□ 0.8
Otop1Q80VM9 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC20.04■□□□□ 0.8
Otop1Q80VM9 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Otop1Q80VM9 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Otop1Q80VM9 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Otop1Q80VM9 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.04■□□□□ 0.8
Otop1Q80VM9 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Otop1Q80VM9 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Otop1Q80VM9 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Otop1Q80VM9 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Otop1Q80VM9 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Otop1Q80VM9 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC20.03■□□□□ 0.8
Otop1Q80VM9 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Otop1Q80VM9 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Otop1Q80VM9 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Otop1Q80VM9 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Otop1Q80VM9 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Otop1Q80VM9 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Otop1Q80VM9 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Otop1Q80VM9 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Otop1Q80VM9 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Otop1Q80VM9 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Otop1Q80VM9 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Otop1Q80VM9 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC20.01■□□□□ 0.79
Otop1Q80VM9 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC20.01■□□□□ 0.79
Otop1Q80VM9 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Otop1Q80VM9 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
Otop1Q80VM9 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC20■□□□□ 0.79
Otop1Q80VM9 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Otop1Q80VM9 Gm29257-201ENSMUST00000186115 639 ntBASIC20■□□□□ 0.79
Otop1Q80VM9 Gm43137-201ENSMUST00000198052 594 ntBASIC20■□□□□ 0.79
Otop1Q80VM9 Gm21168-201ENSMUST00000199646 1096 ntBASIC20■□□□□ 0.79
Otop1Q80VM9 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Otop1Q80VM9 Gm42699-201ENSMUST00000198104 1657 ntBASIC20■□□□□ 0.79
Otop1Q80VM9 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Otop1Q80VM9 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Otop1Q80VM9 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Otop1Q80VM9 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Otop1Q80VM9 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Otop1Q80VM9 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Otop1Q80VM9 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC19.99■□□□□ 0.79
Otop1Q80VM9 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC19.99■□□□□ 0.79
Otop1Q80VM9 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Otop1Q80VM9 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Otop1Q80VM9 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Otop1Q80VM9 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Otop1Q80VM9 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Otop1Q80VM9 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Otop1Q80VM9 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Otop1Q80VM9 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Otop1Q80VM9 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Otop1Q80VM9 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
Otop1Q80VM9 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC19.98■□□□□ 0.79
Otop1Q80VM9 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC19.98■□□□□ 0.79
Otop1Q80VM9 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Otop1Q80VM9 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Otop1Q80VM9 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC19.98■□□□□ 0.79
Otop1Q80VM9 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Otop1Q80VM9 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Otop1Q80VM9 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Otop1Q80VM9 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Otop1Q80VM9 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Otop1Q80VM9 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC19.97■□□□□ 0.79
Otop1Q80VM9 Mir7075-201ENSMUST00000184187 82 ntBASIC19.97■□□□□ 0.79
Otop1Q80VM9 Gm43017-201ENSMUST00000198296 752 ntBASIC19.97■□□□□ 0.79
Otop1Q80VM9 Gm9870-201ENSMUST00000063874 645 ntBASIC19.97■□□□□ 0.79
Otop1Q80VM9 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Otop1Q80VM9 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Otop1Q80VM9 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Otop1Q80VM9 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Otop1Q80VM9 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC19.96■□□□□ 0.79
Otop1Q80VM9 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Otop1Q80VM9 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms