Protein–RNA interactions for Protein: Q80UU2

Rpp38, Ribonuclease P protein subunit p38, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp38Q80UU2 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Rpp38Q80UU2 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Rpp38Q80UU2 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rpp38Q80UU2 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rpp38Q80UU2 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rpp38Q80UU2 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Rpp38Q80UU2 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Rpp38Q80UU2 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Rpp38Q80UU2 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Rpp38Q80UU2 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Rpp38Q80UU2 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC21.02■□□□□ 0.96
Rpp38Q80UU2 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Rpp38Q80UU2 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rpp38Q80UU2 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rpp38Q80UU2 Gm44949-201ENSMUST00000206423 1450 ntBASIC21.01■□□□□ 0.95
Rpp38Q80UU2 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rpp38Q80UU2 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rpp38Q80UU2 Gm10399-202ENSMUST00000202768 748 ntBASIC21.01■□□□□ 0.95
Rpp38Q80UU2 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rpp38Q80UU2 Gm5812-201ENSMUST00000061073 957 ntBASIC21.01■□□□□ 0.95
Rpp38Q80UU2 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rpp38Q80UU2 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rpp38Q80UU2 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rpp38Q80UU2 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
Rpp38Q80UU2 Gm10620-201ENSMUST00000098379 1332 ntBASIC21.01■□□□□ 0.95
Rpp38Q80UU2 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC21■□□□□ 0.95
Rpp38Q80UU2 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Rpp38Q80UU2 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Rpp38Q80UU2 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC21■□□□□ 0.95
Rpp38Q80UU2 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC21■□□□□ 0.95
Rpp38Q80UU2 Gm12504-201ENSMUST00000120860 2231 ntBASIC21■□□□□ 0.95
Rpp38Q80UU2 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rpp38Q80UU2 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rpp38Q80UU2 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rpp38Q80UU2 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rpp38Q80UU2 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rpp38Q80UU2 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rpp38Q80UU2 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Rpp38Q80UU2 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Rpp38Q80UU2 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC20.99■□□□□ 0.95
Rpp38Q80UU2 Gm18755-201ENSMUST00000218030 1099 ntBASIC20.99■□□□□ 0.95
Rpp38Q80UU2 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC20.99■□□□□ 0.95
Rpp38Q80UU2 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rpp38Q80UU2 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC20.99■□□□□ 0.95
Rpp38Q80UU2 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rpp38Q80UU2 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rpp38Q80UU2 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rpp38Q80UU2 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rpp38Q80UU2 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Rpp38Q80UU2 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC20.98■□□□□ 0.95
Rpp38Q80UU2 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Rpp38Q80UU2 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
Rpp38Q80UU2 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
Rpp38Q80UU2 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rpp38Q80UU2 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Rpp38Q80UU2 Gm5913-201ENSMUST00000119397 1399 ntBASIC20.97■□□□□ 0.95
Rpp38Q80UU2 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Rpp38Q80UU2 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rpp38Q80UU2 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rpp38Q80UU2 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Rpp38Q80UU2 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.95
Rpp38Q80UU2 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rpp38Q80UU2 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rpp38Q80UU2 Gm5522-201ENSMUST00000189483 1242 ntBASIC20.95■□□□□ 0.94
Rpp38Q80UU2 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Rpp38Q80UU2 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rpp38Q80UU2 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rpp38Q80UU2 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC20.94■□□□□ 0.94
Rpp38Q80UU2 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC20.94■□□□□ 0.94
Rpp38Q80UU2 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rpp38Q80UU2 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Rpp38Q80UU2 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC20.93■□□□□ 0.94
Rpp38Q80UU2 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC20.93■□□□□ 0.94
Rpp38Q80UU2 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC20.93■□□□□ 0.94
Rpp38Q80UU2 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Rpp38Q80UU2 Kdm3b-204ENSMUST00000224715 2032 ntBASIC20.92■□□□□ 0.94
Rpp38Q80UU2 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rpp38Q80UU2 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.92■□□□□ 0.94
Rpp38Q80UU2 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rpp38Q80UU2 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Rpp38Q80UU2 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Rpp38Q80UU2 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rpp38Q80UU2 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Rpp38Q80UU2 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Rpp38Q80UU2 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rpp38Q80UU2 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Rpp38Q80UU2 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rpp38Q80UU2 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Rpp38Q80UU2 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rpp38Q80UU2 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC20.91■□□□□ 0.94
Rpp38Q80UU2 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Rpp38Q80UU2 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC20.9■□□□□ 0.94
Rpp38Q80UU2 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rpp38Q80UU2 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rpp38Q80UU2 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rpp38Q80UU2 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Rpp38Q80UU2 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Rpp38Q80UU2 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
Rpp38Q80UU2 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Rpp38Q80UU2 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 11.3 ms