Protein–RNA interactions for Protein: Q6W8Q3

Pcp4l1, Purkinje cell protein 4-like protein 1, mousemouse

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcp4l1Q6W8Q3 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcp4l1Q6W8Q3 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Pcp4l1Q6W8Q3 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcp4l1Q6W8Q3 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcp4l1Q6W8Q3 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcp4l1Q6W8Q3 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Pcp4l1Q6W8Q3 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcp4l1Q6W8Q3 Fam105a-203ENSMUST00000226170 3043 ntBASIC17.2■□□□□ 0.34
Pcp4l1Q6W8Q3 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Pcp4l1Q6W8Q3 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcp4l1Q6W8Q3 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcp4l1Q6W8Q3 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcp4l1Q6W8Q3 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcp4l1Q6W8Q3 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
Pcp4l1Q6W8Q3 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcp4l1Q6W8Q3 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcp4l1Q6W8Q3 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Pcp4l1Q6W8Q3 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcp4l1Q6W8Q3 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC17.18■□□□□ 0.34
Pcp4l1Q6W8Q3 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC17.18■□□□□ 0.34
Pcp4l1Q6W8Q3 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Pcp4l1Q6W8Q3 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Pcp4l1Q6W8Q3 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcp4l1Q6W8Q3 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Pcp4l1Q6W8Q3 Gm42699-201ENSMUST00000198104 1657 ntBASIC17.17■□□□□ 0.34
Pcp4l1Q6W8Q3 Gm30346-201ENSMUST00000218641 1699 ntBASIC17.17■□□□□ 0.34
Pcp4l1Q6W8Q3 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcp4l1Q6W8Q3 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Pcp4l1Q6W8Q3 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcp4l1Q6W8Q3 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcp4l1Q6W8Q3 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcp4l1Q6W8Q3 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Pcp4l1Q6W8Q3 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcp4l1Q6W8Q3 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcp4l1Q6W8Q3 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcp4l1Q6W8Q3 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Pcp4l1Q6W8Q3 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcp4l1Q6W8Q3 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcp4l1Q6W8Q3 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Pcp4l1Q6W8Q3 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcp4l1Q6W8Q3 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC17.16■□□□□ 0.34
Pcp4l1Q6W8Q3 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Pcp4l1Q6W8Q3 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcp4l1Q6W8Q3 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcp4l1Q6W8Q3 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcp4l1Q6W8Q3 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcp4l1Q6W8Q3 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcp4l1Q6W8Q3 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Pcp4l1Q6W8Q3 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.34
Pcp4l1Q6W8Q3 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcp4l1Q6W8Q3 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Pcp4l1Q6W8Q3 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcp4l1Q6W8Q3 Gm37812-201ENSMUST00000195216 2475 ntBASIC17.14■□□□□ 0.33
Pcp4l1Q6W8Q3 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Pcp4l1Q6W8Q3 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcp4l1Q6W8Q3 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Pcp4l1Q6W8Q3 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcp4l1Q6W8Q3 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Pcp4l1Q6W8Q3 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
Pcp4l1Q6W8Q3 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Pcp4l1Q6W8Q3 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcp4l1Q6W8Q3 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcp4l1Q6W8Q3 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcp4l1Q6W8Q3 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcp4l1Q6W8Q3 Gm45606-201ENSMUST00000209836 2795 ntBASIC17.12■□□□□ 0.33
Pcp4l1Q6W8Q3 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcp4l1Q6W8Q3 Gm5784-201ENSMUST00000179344 2478 ntBASIC17.12■□□□□ 0.33
Pcp4l1Q6W8Q3 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcp4l1Q6W8Q3 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcp4l1Q6W8Q3 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcp4l1Q6W8Q3 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcp4l1Q6W8Q3 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcp4l1Q6W8Q3 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcp4l1Q6W8Q3 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcp4l1Q6W8Q3 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcp4l1Q6W8Q3 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Pcp4l1Q6W8Q3 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcp4l1Q6W8Q3 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcp4l1Q6W8Q3 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcp4l1Q6W8Q3 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcp4l1Q6W8Q3 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Pcp4l1Q6W8Q3 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcp4l1Q6W8Q3 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcp4l1Q6W8Q3 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcp4l1Q6W8Q3 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC17.1■□□□□ 0.33
Pcp4l1Q6W8Q3 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC17.1■□□□□ 0.33
Pcp4l1Q6W8Q3 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Pcp4l1Q6W8Q3 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC17.1■□□□□ 0.33
Pcp4l1Q6W8Q3 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.1■□□□□ 0.33
Pcp4l1Q6W8Q3 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcp4l1Q6W8Q3 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcp4l1Q6W8Q3 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Pcp4l1Q6W8Q3 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcp4l1Q6W8Q3 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcp4l1Q6W8Q3 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcp4l1Q6W8Q3 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Pcp4l1Q6W8Q3 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcp4l1Q6W8Q3 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Pcp4l1Q6W8Q3 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Pcp4l1Q6W8Q3 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 14.2 ms