Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rif1Q6PR54 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rif1Q6PR54 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rif1Q6PR54 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Rif1Q6PR54 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rif1Q6PR54 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Rif1Q6PR54 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC17.92■□□□□ 0.46
Rif1Q6PR54 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Rif1Q6PR54 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rif1Q6PR54 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Rif1Q6PR54 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
Rif1Q6PR54 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Rif1Q6PR54 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Rif1Q6PR54 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Rif1Q6PR54 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rif1Q6PR54 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC17.91■□□□□ 0.46
Rif1Q6PR54 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
Rif1Q6PR54 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC17.91■□□□□ 0.46
Rif1Q6PR54 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Rif1Q6PR54 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rif1Q6PR54 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rif1Q6PR54 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Rif1Q6PR54 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC17.9■□□□□ 0.46
Rif1Q6PR54 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Rif1Q6PR54 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Rif1Q6PR54 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Rif1Q6PR54 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rif1Q6PR54 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Rif1Q6PR54 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Rif1Q6PR54 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC17.9■□□□□ 0.46
Rif1Q6PR54 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Rif1Q6PR54 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rif1Q6PR54 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Rif1Q6PR54 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC17.89■□□□□ 0.46
Rif1Q6PR54 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rif1Q6PR54 Krt8-ps-201ENSMUST00000208495 945 ntBASIC17.89■□□□□ 0.45
Rif1Q6PR54 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC17.89■□□□□ 0.45
Rif1Q6PR54 Gm40848-201ENSMUST00000221998 324 ntBASIC17.89■□□□□ 0.45
Rif1Q6PR54 Gm13836-201ENSMUST00000121159 501 ntBASIC17.89■□□□□ 0.45
Rif1Q6PR54 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC17.89■□□□□ 0.45
Rif1Q6PR54 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Rif1Q6PR54 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC17.88■□□□□ 0.45
Rif1Q6PR54 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Rif1Q6PR54 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC17.88■□□□□ 0.45
Rif1Q6PR54 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC17.88■□□□□ 0.45
Rif1Q6PR54 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Rif1Q6PR54 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rif1Q6PR54 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC17.87■□□□□ 0.45
Rif1Q6PR54 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rif1Q6PR54 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Rif1Q6PR54 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rif1Q6PR54 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC17.86■□□□□ 0.45
Rif1Q6PR54 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rif1Q6PR54 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rif1Q6PR54 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC17.86■□□□□ 0.45
Rif1Q6PR54 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rif1Q6PR54 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rif1Q6PR54 Gm6206-201ENSMUST00000133472 2199 ntBASIC17.86■□□□□ 0.45
Rif1Q6PR54 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Rif1Q6PR54 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Rif1Q6PR54 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC17.85■□□□□ 0.45
Rif1Q6PR54 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rif1Q6PR54 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rif1Q6PR54 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Rif1Q6PR54 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rif1Q6PR54 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Rif1Q6PR54 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Rif1Q6PR54 Gm12441-201ENSMUST00000121806 588 ntBASIC17.84■□□□□ 0.45
Rif1Q6PR54 Gm29241-201ENSMUST00000189260 1096 ntBASIC17.84■□□□□ 0.45
Rif1Q6PR54 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rif1Q6PR54 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rif1Q6PR54 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Rif1Q6PR54 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC17.83■□□□□ 0.45
Rif1Q6PR54 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC17.83■□□□□ 0.45
Rif1Q6PR54 Gm4968-201ENSMUST00000071458 858 ntBASIC17.83■□□□□ 0.45
Rif1Q6PR54 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Rif1Q6PR54 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Rif1Q6PR54 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Rif1Q6PR54 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rif1Q6PR54 Gm13181-201ENSMUST00000120117 1069 ntBASIC17.83■□□□□ 0.44
Rif1Q6PR54 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
Rif1Q6PR54 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rif1Q6PR54 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Rif1Q6PR54 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rif1Q6PR54 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC17.82■□□□□ 0.44
Rif1Q6PR54 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Rif1Q6PR54 Gm42778-201ENSMUST00000199644 553 ntBASIC17.81■□□□□ 0.44
Rif1Q6PR54 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rif1Q6PR54 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rif1Q6PR54 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rif1Q6PR54 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC17.8■□□□□ 0.44
Rif1Q6PR54 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC17.8■□□□□ 0.44
Rif1Q6PR54 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rif1Q6PR54 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Rif1Q6PR54 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC17.8■□□□□ 0.44
Rif1Q6PR54 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
Rif1Q6PR54 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC17.79■□□□□ 0.44
Rif1Q6PR54 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rif1Q6PR54 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
Rif1Q6PR54 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms