Protein–RNA interactions for Protein: Q6PDC0

Rundc3b, RUN domain-containing protein 3B, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rundc3bQ6PDC0 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rundc3bQ6PDC0 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC19.64■□□□□ 0.73
Rundc3bQ6PDC0 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Rundc3bQ6PDC0 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rundc3bQ6PDC0 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rundc3bQ6PDC0 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rundc3bQ6PDC0 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC19.63■□□□□ 0.73
Rundc3bQ6PDC0 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC19.63■□□□□ 0.73
Rundc3bQ6PDC0 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
Rundc3bQ6PDC0 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
Rundc3bQ6PDC0 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC19.62■□□□□ 0.73
Rundc3bQ6PDC0 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rundc3bQ6PDC0 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC19.62■□□□□ 0.73
Rundc3bQ6PDC0 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rundc3bQ6PDC0 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rundc3bQ6PDC0 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC19.61■□□□□ 0.73
Rundc3bQ6PDC0 AC131739.1-201ENSMUST00000221692 1245 ntBASIC19.61■□□□□ 0.73
Rundc3bQ6PDC0 AC164883.3-201ENSMUST00000227396 1774 ntBASIC19.61■□□□□ 0.73
Rundc3bQ6PDC0 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rundc3bQ6PDC0 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Rundc3bQ6PDC0 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC19.61■□□□□ 0.73
Rundc3bQ6PDC0 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rundc3bQ6PDC0 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Rundc3bQ6PDC0 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rundc3bQ6PDC0 Snhg20-203ENSMUST00000182811 2153 ntBASIC19.6■□□□□ 0.73
Rundc3bQ6PDC0 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rundc3bQ6PDC0 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rundc3bQ6PDC0 Gm44949-201ENSMUST00000206423 1450 ntBASIC19.6■□□□□ 0.73
Rundc3bQ6PDC0 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rundc3bQ6PDC0 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC19.6■□□□□ 0.73
Rundc3bQ6PDC0 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rundc3bQ6PDC0 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rundc3bQ6PDC0 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rundc3bQ6PDC0 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rundc3bQ6PDC0 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rundc3bQ6PDC0 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Rundc3bQ6PDC0 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rundc3bQ6PDC0 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rundc3bQ6PDC0 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rundc3bQ6PDC0 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
Rundc3bQ6PDC0 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rundc3bQ6PDC0 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rundc3bQ6PDC0 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
Rundc3bQ6PDC0 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Rundc3bQ6PDC0 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
Rundc3bQ6PDC0 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Rundc3bQ6PDC0 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
Rundc3bQ6PDC0 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Rundc3bQ6PDC0 Gm12818-201ENSMUST00000117562 1349 ntBASIC19.57■□□□□ 0.72
Rundc3bQ6PDC0 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Rundc3bQ6PDC0 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rundc3bQ6PDC0 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC19.57■□□□□ 0.72
Rundc3bQ6PDC0 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Rundc3bQ6PDC0 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Rundc3bQ6PDC0 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rundc3bQ6PDC0 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Rundc3bQ6PDC0 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rundc3bQ6PDC0 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rundc3bQ6PDC0 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rundc3bQ6PDC0 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC19.56■□□□□ 0.72
Rundc3bQ6PDC0 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rundc3bQ6PDC0 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rundc3bQ6PDC0 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rundc3bQ6PDC0 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rundc3bQ6PDC0 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Rundc3bQ6PDC0 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC19.56■□□□□ 0.72
Rundc3bQ6PDC0 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rundc3bQ6PDC0 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rundc3bQ6PDC0 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Rundc3bQ6PDC0 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rundc3bQ6PDC0 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Rundc3bQ6PDC0 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rundc3bQ6PDC0 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC19.55■□□□□ 0.72
Rundc3bQ6PDC0 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Rundc3bQ6PDC0 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rundc3bQ6PDC0 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rundc3bQ6PDC0 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Rundc3bQ6PDC0 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rundc3bQ6PDC0 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rundc3bQ6PDC0 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC19.54■□□□□ 0.72
Rundc3bQ6PDC0 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rundc3bQ6PDC0 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Rundc3bQ6PDC0 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rundc3bQ6PDC0 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rundc3bQ6PDC0 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Rundc3bQ6PDC0 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rundc3bQ6PDC0 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Rundc3bQ6PDC0 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Rundc3bQ6PDC0 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Rundc3bQ6PDC0 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Rundc3bQ6PDC0 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rundc3bQ6PDC0 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Rundc3bQ6PDC0 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rundc3bQ6PDC0 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Rundc3bQ6PDC0 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rundc3bQ6PDC0 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC19.53■□□□□ 0.72
Rundc3bQ6PDC0 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Rundc3bQ6PDC0 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rundc3bQ6PDC0 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Rundc3bQ6PDC0 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms