Protein–RNA interactions for Protein: Q6P1Y1

Rtl3, Retrotransposon Gag-like protein 3, mousemouse

Predictions only

Length 553 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl3Q6P1Y1 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC21.61■■□□□ 1.05
Rtl3Q6P1Y1 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Rtl3Q6P1Y1 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Rtl3Q6P1Y1 Gm26766-202ENSMUST00000227544 2347 ntBASIC21.61■■□□□ 1.05
Rtl3Q6P1Y1 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Rtl3Q6P1Y1 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Rtl3Q6P1Y1 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Rtl3Q6P1Y1 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC21.6■■□□□ 1.05
Rtl3Q6P1Y1 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
Rtl3Q6P1Y1 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC21.6■■□□□ 1.05
Rtl3Q6P1Y1 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Rtl3Q6P1Y1 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC21.6■■□□□ 1.05
Rtl3Q6P1Y1 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC21.6■■□□□ 1.05
Rtl3Q6P1Y1 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Rtl3Q6P1Y1 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Rtl3Q6P1Y1 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Rtl3Q6P1Y1 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Rtl3Q6P1Y1 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Rtl3Q6P1Y1 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Rtl3Q6P1Y1 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Rtl3Q6P1Y1 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Rtl3Q6P1Y1 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Rtl3Q6P1Y1 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Rtl3Q6P1Y1 Gm17641-201ENSMUST00000166328 2350 ntBASIC21.58■■□□□ 1.05
Rtl3Q6P1Y1 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Rtl3Q6P1Y1 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Rtl3Q6P1Y1 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC21.58■■□□□ 1.05
Rtl3Q6P1Y1 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC21.58■■□□□ 1.05
Rtl3Q6P1Y1 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
Rtl3Q6P1Y1 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Rtl3Q6P1Y1 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Rtl3Q6P1Y1 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Rtl3Q6P1Y1 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC21.58■■□□□ 1.04
Rtl3Q6P1Y1 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Rtl3Q6P1Y1 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Rtl3Q6P1Y1 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC21.57■■□□□ 1.04
Rtl3Q6P1Y1 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Rtl3Q6P1Y1 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC21.57■■□□□ 1.04
Rtl3Q6P1Y1 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Rtl3Q6P1Y1 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
Rtl3Q6P1Y1 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC21.57■■□□□ 1.04
Rtl3Q6P1Y1 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Rtl3Q6P1Y1 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Rtl3Q6P1Y1 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Rtl3Q6P1Y1 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC21.56■■□□□ 1.04
Rtl3Q6P1Y1 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
Rtl3Q6P1Y1 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
Rtl3Q6P1Y1 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Rtl3Q6P1Y1 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Rtl3Q6P1Y1 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Rtl3Q6P1Y1 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Rtl3Q6P1Y1 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Rtl3Q6P1Y1 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
Rtl3Q6P1Y1 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC21.55■■□□□ 1.04
Rtl3Q6P1Y1 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Rtl3Q6P1Y1 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Rtl3Q6P1Y1 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC21.55■■□□□ 1.04
Rtl3Q6P1Y1 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Rtl3Q6P1Y1 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Rtl3Q6P1Y1 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
Rtl3Q6P1Y1 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC21.54■■□□□ 1.04
Rtl3Q6P1Y1 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
Rtl3Q6P1Y1 Gm7417-201ENSMUST00000192950 473 ntBASIC21.54■■□□□ 1.04
Rtl3Q6P1Y1 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC21.54■■□□□ 1.04
Rtl3Q6P1Y1 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Rtl3Q6P1Y1 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Rtl3Q6P1Y1 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Rtl3Q6P1Y1 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
Rtl3Q6P1Y1 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Rtl3Q6P1Y1 Gm37415-201ENSMUST00000192265 2054 ntBASIC21.54■■□□□ 1.04
Rtl3Q6P1Y1 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC21.54■■□□□ 1.04
Rtl3Q6P1Y1 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Rtl3Q6P1Y1 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Rtl3Q6P1Y1 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
Rtl3Q6P1Y1 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Rtl3Q6P1Y1 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Rtl3Q6P1Y1 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Rtl3Q6P1Y1 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Rtl3Q6P1Y1 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Rtl3Q6P1Y1 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Rtl3Q6P1Y1 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC21.52■■□□□ 1.04
Rtl3Q6P1Y1 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Rtl3Q6P1Y1 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Rtl3Q6P1Y1 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.03
Rtl3Q6P1Y1 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.03
Rtl3Q6P1Y1 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
Rtl3Q6P1Y1 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Rtl3Q6P1Y1 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Rtl3Q6P1Y1 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Rtl3Q6P1Y1 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Rtl3Q6P1Y1 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Rtl3Q6P1Y1 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Rtl3Q6P1Y1 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Rtl3Q6P1Y1 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Rtl3Q6P1Y1 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Rtl3Q6P1Y1 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Rtl3Q6P1Y1 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Rtl3Q6P1Y1 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
Rtl3Q6P1Y1 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Rtl3Q6P1Y1 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC21.49■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 75.3 ms