Protein–RNA interactions for Protein: Q6NZF1

Zc3h11a, Zinc finger CCCH domain-containing protein 11A, mousemouse

Known RBP Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3h11aQ6NZF1 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Zc3h11aQ6NZF1 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Zc3h11aQ6NZF1 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Zc3h11aQ6NZF1 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Zc3h11aQ6NZF1 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Zc3h11aQ6NZF1 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Zc3h11aQ6NZF1 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Zc3h11aQ6NZF1 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Zc3h11aQ6NZF1 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC20.38■□□□□ 0.85
Zc3h11aQ6NZF1 Gm15546-201ENSMUST00000122095 826 ntBASIC20.38■□□□□ 0.85
Zc3h11aQ6NZF1 Gm5522-201ENSMUST00000189483 1242 ntBASIC20.38■□□□□ 0.85
Zc3h11aQ6NZF1 Gm18755-201ENSMUST00000218030 1099 ntBASIC20.38■□□□□ 0.85
Zc3h11aQ6NZF1 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Zc3h11aQ6NZF1 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Zc3h11aQ6NZF1 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
Zc3h11aQ6NZF1 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Zc3h11aQ6NZF1 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Zc3h11aQ6NZF1 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Zc3h11aQ6NZF1 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Zc3h11aQ6NZF1 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC20.37■□□□□ 0.85
Zc3h11aQ6NZF1 Gm37415-201ENSMUST00000192265 2054 ntBASIC20.37■□□□□ 0.85
Zc3h11aQ6NZF1 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Zc3h11aQ6NZF1 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC20.37■□□□□ 0.85
Zc3h11aQ6NZF1 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Zc3h11aQ6NZF1 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Zc3h11aQ6NZF1 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC20.36■□□□□ 0.85
Zc3h11aQ6NZF1 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Zc3h11aQ6NZF1 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Zc3h11aQ6NZF1 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Zc3h11aQ6NZF1 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Zc3h11aQ6NZF1 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Zc3h11aQ6NZF1 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Zc3h11aQ6NZF1 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC20.35■□□□□ 0.85
Zc3h11aQ6NZF1 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Zc3h11aQ6NZF1 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Zc3h11aQ6NZF1 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Zc3h11aQ6NZF1 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Zc3h11aQ6NZF1 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Zc3h11aQ6NZF1 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Zc3h11aQ6NZF1 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Zc3h11aQ6NZF1 Gm15820-201ENSMUST00000201566 728 ntBASIC20.34■□□□□ 0.85
Zc3h11aQ6NZF1 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC20.34■□□□□ 0.85
Zc3h11aQ6NZF1 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Zc3h11aQ6NZF1 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Zc3h11aQ6NZF1 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Zc3h11aQ6NZF1 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Zc3h11aQ6NZF1 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Zc3h11aQ6NZF1 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC20.33■□□□□ 0.84
Zc3h11aQ6NZF1 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC20.33■□□□□ 0.84
Zc3h11aQ6NZF1 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Zc3h11aQ6NZF1 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
Zc3h11aQ6NZF1 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Zc3h11aQ6NZF1 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC20.32■□□□□ 0.84
Zc3h11aQ6NZF1 Gm42501-201ENSMUST00000200220 1026 ntBASIC20.32■□□□□ 0.84
Zc3h11aQ6NZF1 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC20.32■□□□□ 0.84
Zc3h11aQ6NZF1 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Zc3h11aQ6NZF1 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Zc3h11aQ6NZF1 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Zc3h11aQ6NZF1 Gm32051-202ENSMUST00000197905 2385 ntBASIC20.31■□□□□ 0.84
Zc3h11aQ6NZF1 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Zc3h11aQ6NZF1 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.31■□□□□ 0.84
Zc3h11aQ6NZF1 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Zc3h11aQ6NZF1 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Zc3h11aQ6NZF1 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Zc3h11aQ6NZF1 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Zc3h11aQ6NZF1 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Zc3h11aQ6NZF1 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
Zc3h11aQ6NZF1 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Zc3h11aQ6NZF1 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC20.3■□□□□ 0.84
Zc3h11aQ6NZF1 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Zc3h11aQ6NZF1 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Zc3h11aQ6NZF1 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Zc3h11aQ6NZF1 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Zc3h11aQ6NZF1 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
Zc3h11aQ6NZF1 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Zc3h11aQ6NZF1 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC20.29■□□□□ 0.84
Zc3h11aQ6NZF1 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC20.29■□□□□ 0.84
Zc3h11aQ6NZF1 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Zc3h11aQ6NZF1 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Zc3h11aQ6NZF1 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Zc3h11aQ6NZF1 Gm10399-202ENSMUST00000202768 748 ntBASIC20.28■□□□□ 0.84
Zc3h11aQ6NZF1 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Zc3h11aQ6NZF1 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Zc3h11aQ6NZF1 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Zc3h11aQ6NZF1 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Zc3h11aQ6NZF1 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Zc3h11aQ6NZF1 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Zc3h11aQ6NZF1 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Zc3h11aQ6NZF1 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Zc3h11aQ6NZF1 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Zc3h11aQ6NZF1 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Zc3h11aQ6NZF1 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Zc3h11aQ6NZF1 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Zc3h11aQ6NZF1 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Zc3h11aQ6NZF1 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC20.26■□□□□ 0.83
Zc3h11aQ6NZF1 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Zc3h11aQ6NZF1 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC20.26■□□□□ 0.83
Zc3h11aQ6NZF1 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Zc3h11aQ6NZF1 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Zc3h11aQ6NZF1 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms