Protein–RNA interactions for Protein: Q6IRT3

Parpbp, PCNA-interacting partner, mousemouse

Predictions only

Length 573 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ParpbpQ6IRT3 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ParpbpQ6IRT3 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
ParpbpQ6IRT3 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
ParpbpQ6IRT3 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ParpbpQ6IRT3 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
ParpbpQ6IRT3 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ParpbpQ6IRT3 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
ParpbpQ6IRT3 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC19.54■□□□□ 0.72
ParpbpQ6IRT3 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC19.54■□□□□ 0.72
ParpbpQ6IRT3 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC19.54■□□□□ 0.72
ParpbpQ6IRT3 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ParpbpQ6IRT3 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC19.54■□□□□ 0.72
ParpbpQ6IRT3 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ParpbpQ6IRT3 AC158990.1-201ENSMUST00000221450 2016 ntBASIC19.54■□□□□ 0.72
ParpbpQ6IRT3 Gm8093-201ENSMUST00000128935 1892 ntBASIC19.54■□□□□ 0.72
ParpbpQ6IRT3 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
ParpbpQ6IRT3 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
ParpbpQ6IRT3 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
ParpbpQ6IRT3 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ParpbpQ6IRT3 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC19.53■□□□□ 0.72
ParpbpQ6IRT3 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ParpbpQ6IRT3 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ParpbpQ6IRT3 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
ParpbpQ6IRT3 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
ParpbpQ6IRT3 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ParpbpQ6IRT3 Dmtn-209ENSMUST00000228295 2572 ntBASIC19.53■□□□□ 0.72
ParpbpQ6IRT3 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ParpbpQ6IRT3 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
ParpbpQ6IRT3 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
ParpbpQ6IRT3 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ParpbpQ6IRT3 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.52■□□□□ 0.72
ParpbpQ6IRT3 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ParpbpQ6IRT3 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ParpbpQ6IRT3 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ParpbpQ6IRT3 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
ParpbpQ6IRT3 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ParpbpQ6IRT3 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
ParpbpQ6IRT3 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
ParpbpQ6IRT3 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC19.52■□□□□ 0.72
ParpbpQ6IRT3 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
ParpbpQ6IRT3 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC19.52■□□□□ 0.72
ParpbpQ6IRT3 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC19.52■□□□□ 0.72
ParpbpQ6IRT3 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
ParpbpQ6IRT3 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
ParpbpQ6IRT3 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ParpbpQ6IRT3 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ParpbpQ6IRT3 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ParpbpQ6IRT3 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
ParpbpQ6IRT3 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ParpbpQ6IRT3 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ParpbpQ6IRT3 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ParpbpQ6IRT3 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
ParpbpQ6IRT3 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC19.5■□□□□ 0.71
ParpbpQ6IRT3 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
ParpbpQ6IRT3 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
ParpbpQ6IRT3 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ParpbpQ6IRT3 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
ParpbpQ6IRT3 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
ParpbpQ6IRT3 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ParpbpQ6IRT3 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
ParpbpQ6IRT3 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
ParpbpQ6IRT3 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
ParpbpQ6IRT3 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
ParpbpQ6IRT3 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
ParpbpQ6IRT3 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ParpbpQ6IRT3 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC19.49■□□□□ 0.71
ParpbpQ6IRT3 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC19.49■□□□□ 0.71
ParpbpQ6IRT3 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.49■□□□□ 0.71
ParpbpQ6IRT3 Gm42418-201ENSMUST00000182010 1831 ntBASIC19.48■□□□□ 0.71
ParpbpQ6IRT3 Gm13042-201ENSMUST00000119244 1955 ntBASIC19.48■□□□□ 0.71
ParpbpQ6IRT3 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
ParpbpQ6IRT3 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
ParpbpQ6IRT3 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ParpbpQ6IRT3 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
ParpbpQ6IRT3 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
ParpbpQ6IRT3 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ParpbpQ6IRT3 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
ParpbpQ6IRT3 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.47■□□□□ 0.71
ParpbpQ6IRT3 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ParpbpQ6IRT3 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ParpbpQ6IRT3 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
ParpbpQ6IRT3 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ParpbpQ6IRT3 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
ParpbpQ6IRT3 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
ParpbpQ6IRT3 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
ParpbpQ6IRT3 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ParpbpQ6IRT3 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
ParpbpQ6IRT3 Gm32051-202ENSMUST00000197905 2385 ntBASIC19.46■□□□□ 0.71
ParpbpQ6IRT3 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
ParpbpQ6IRT3 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC19.46■□□□□ 0.71
ParpbpQ6IRT3 Gm16464-201ENSMUST00000117815 1095 ntBASIC19.46■□□□□ 0.71
ParpbpQ6IRT3 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
ParpbpQ6IRT3 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
ParpbpQ6IRT3 Gm5812-201ENSMUST00000061073 957 ntBASIC19.46■□□□□ 0.71
ParpbpQ6IRT3 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
ParpbpQ6IRT3 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ParpbpQ6IRT3 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ParpbpQ6IRT3 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
ParpbpQ6IRT3 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC19.45■□□□□ 0.7
ParpbpQ6IRT3 Gm15820-201ENSMUST00000201566 728 ntBASIC19.45■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 502.1 ms